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PLM3_60_coex_sep16_scaffold_19244_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_8

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: comp(940..1887)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 311.0
  • Bit_score: 406
  • Evalue 2.00e-110
DNA-directed RNA polymerase subunit alpha Tax=Actinokineospora enzanensis RepID=UPI00036C8A6B similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 311.0
  • Bit_score: 404
  • Evalue 5.40e-110
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 307.0
  • Bit_score: 404
  • Evalue 1.50e-110

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Taxonomy

Saccharopolyspora rectivirgula → Saccharopolyspora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 948
GTGAACACCGTACCCATGGAGATCTCGCGCCCCCGCATCGAATCCAACCCACTGTCGGACACCCGCTCGCGCTTCGTCATCGAGCCGCTGGAGCCGGGCTTCGGCTACACGCTGGGCAACTCGCTGCGCCGCACCCTGCTGTCGTCCATCCCGGGCGCCGCGGTCACATCGATCAAGATCGACGGCGTCCTGCACGAGTTCACGTCCATCCAGGGCGTGAAGGAGGACGTCACCGACGTCATCCTCAACGTCAAGGAGCTGCGCCTGCGCTCGGAGACCAACGAGCCGGCGACCATGTTCCTGCGCTCCACCGGCCCCGGTGACGTGACCGCGGCCGACATCGTGCCCCCGGCCGACATCGACGTCATCAACCCCGAGCTGCACCTGGCCACCCTGAACACCAAGGCCAAGCTGGAGATGGAGCTGCGGGTCGAGAAGGGCCGCGGCTACCGCCCGGCCGAGCGCAACAAGTCGGCCTCCGACGAGATCGGCCGCATCCCGGTCGACTCGATCTTCTCCCCGGTGCGCCGGGTCAGCTACACCGTCGAGGCCACCCGCTCGGGCGAGATGACCAACTACGACCGGCTGATCCTGGACGTCGAGACCGACGGGTCGCTGTCCCCCGAGGACGCGCTGGCCTCGGCCGGCGGGACCCTGCGCGAGCTGGTCAGCCTGTTCGCCGACCTGACCGGCGGCGGCGAGGGCCTCTCGCTCGGCCCGGCCGAGCAGACCGGCCCGCTCGGCGCCAACCTGGACACGCCGATCGAGGAGCTCGACCTGTCGGTCCGCTCCTACAACTGCCTGAAGCGCGAGGGCATCACCACGGTCGGCGAGCTGGTCACCAAGTCCGAGGCCGACCTGCTCGACATCCGCAACTTCGGCGCCAAGTCGATCGACGAGGTCCGCGAGAAGCTCCAGGAGCTCGGCCTTTCGCTGAGGGAGGAATAG
PROTEIN sequence
Length: 316
VNTVPMEISRPRIESNPLSDTRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVLHEFTSIQGVKEDVTDVILNVKELRLRSETNEPATMFLRSTGPGDVTAADIVPPADIDVINPELHLATLNTKAKLEMELRVEKGRGYRPAERNKSASDEIGRIPVDSIFSPVRRVSYTVEATRSGEMTNYDRLILDVETDGSLSPEDALASAGGTLRELVSLFADLTGGGEGLSLGPAEQTGPLGANLDTPIEELDLSVRSYNCLKREGITTVGELVTKSEADLLDIRNFGAKSIDEVREKLQELGLSLREE*