ggKbase home page

PLM3_60_coex_sep16_scaffold_19244_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_8

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: comp(1946..2572)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SH76_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 209.0
  • Bit_score: 290
  • Evalue 9.80e-76
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 209.0
  • Bit_score: 290
  • Evalue 2.80e-76
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 209.0
  • Bit_score: 290
  • Evalue 1.40e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 627
TTGGCGAGATACACCGGCCCTGACTGCAGGCTCTGCCGGCGCGAGAAGACCAAGCTCTTCCTCAAGGGCTCCAAGTGCGAGAGCCCCAAGTGCCCGGTGGAGAAGCGACCCTACCCGCCCGGTGAGCACGGCCGCGGCCGGCTCAAGGAGAGCGAGTACAACCTCCAGCTCCGGGAGAAGCAGAAGGCCCGCCGGATCTACGGCATCCTCGAGAAGCAGTTCCACAACTACTACGTCGAGGCGGCCCGCCGGAAGGGCATCACCGGCGAGACGCTGCTCCAGCTGCTGGAGACGCGGCTGGACAACGTGGTCTACCGGGGCGGCCTGGCCCGCAGCCGCGACCAGGCGCGCCAGCTCGTCCGGCACTCGCACGTGACCGTCAACGGCAGGAAGGTCAACATCCCCTCCTACCAGGTCAAGCCGGGCGACGTCGTCCAGGTGAAGGAGCGCATGCGCCAGAACCTGAACGTCCACGAGTCGATCCAGCTCCAGACCGGCCGGCCCCAGCCGGGCTGGCTCGAGCTGAACGCCGGCGAGGCCAAGCTGACCGTCAACAGCCTCCCGTCCCGGGAGCAGGTCGAGGTGCCCATCCAGGAGCAGCTCATCGTCGAGCTCTACTCCAAGTAA
PROTEIN sequence
Length: 209
LARYTGPDCRLCRREKTKLFLKGSKCESPKCPVEKRPYPPGEHGRGRLKESEYNLQLREKQKARRIYGILEKQFHNYYVEAARRKGITGETLLQLLETRLDNVVYRGGLARSRDQARQLVRHSHVTVNGRKVNIPSYQVKPGDVVQVKERMRQNLNVHESIQLQTGRPQPGWLELNAGEAKLTVNSLPSREQVEVPIQEQLIVELYSK*