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PLM3_60_coex_sep16_scaffold_3503

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3503_1
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..270
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Streptomyces auratus AGR0001 RepID=J2K8Y9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJJ08955.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3503_2
unknown

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280..495
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3503_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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690..1292
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAT6_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV79339.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_60_coex_sep16_scaffold_3503_4
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(1300..2529)
DNA (1230bp) protein (410aa)
UPF0272 protein BLASA_0244 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RL93_BLASD
hypothetical protein
UPF0272 protein BLASA_0244 {ECO:0000256|HAMAP-Rule:MF_01074}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_60_coex_sep16_scaffold_3503_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2526..3257)
DNA (732bp) protein (244aa)
Circadian phase modifier CpmA homolog Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8G3_ACIC5
circadian phase modifier CpmA
Circadian phase modifier CpmA homolog {ECO:0000313|EMBL:ACO34533.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM3_60_coex_sep16_scaffold_3503_6
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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3357..3875
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWR8_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK53878.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_3503_7
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3950..5218
DNA (1269bp) protein (423aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
seryl-tRNA synthetase Tax=Nocardiopsis halophila RepID=UPI00034DE182
PLM3_60_coex_sep16_scaffold_3503_trna_1
unknown

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5285..5372
DNA (88bp)
transferRNA Ser
PLM3_60_coex_sep16_scaffold_3503_8
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5593..6417)
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Frankia sp. QA3 RepID=I9A9L4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV96226.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3503_9
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6518..7084)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UM67_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC49113.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM3_60_coex_sep16_scaffold_3503_10
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(7126..8226)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI00037F8D64
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_60_coex_sep16_scaffold_3503_11
unknown

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comp(8244..8456)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3503_trna_2
unknown

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8659..8734
DNA (76bp)
transferRNA Arg
PLM3_60_coex_sep16_scaffold_3503_12
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8840..9301
DNA (462bp) protein (154aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI00036CB4C5
Uncharacterized protein {ECO:0000313|EMBL:CCM62125.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
site-specific recombinase, phage integrase family
Displaying 14 items

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