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PLM3_60_coex_sep16_scaffold_3619

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3619_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(3..578)
DNA (576bp) protein (192aa)
FAD linked oxidase-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS84_RUBXD
FAD linked oxidase-like protein
FAD linked oxidase-like protein {ECO:0000313|EMBL:ABG05744.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_3619_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(581..2035)
DNA (1455bp) protein (485aa)
D-lactate dehydrogenase (EC:1.1.2.4)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:ABG05745.1}; EC=1.1.2.4 {ECO:0000313|EMBL:ABG05745.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
D-lactate dehydrogenase (Cytochrome) Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS83_RUBXD
PLM3_60_coex_sep16_scaffold_3619_3
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2060..3658)
DNA (1599bp) protein (533aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
malate synthase A (EC:2.3.3.9)
Malate synthase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q370_9FIRM
PLM3_60_coex_sep16_scaffold_3619_4
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3755..4378)
DNA (624bp) protein (208aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxal 5'-phosphate synthase {ECO:0000256|SAAS:SAAS00025317}; EC=1.4.3.5 {ECO:0000256|SAAS:SAAS00025317};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
Pyridoxamine 5'-phosphate oxidase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI68_ROSCS
PLM3_60_coex_sep16_scaffold_3619_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(4400..6949)
DNA (2550bp) protein (850aa)
ABC-type transport system, involved in lipoprotein release, permease component Tax=Frankia sp. QA3 RepID=I9KBL9_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3619_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6957..7715)
DNA (759bp) protein (253aa)
ABC transporter related protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A2R9_THECD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY97867.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_60_coex_sep16_scaffold_3619_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7892..8623
DNA (732bp) protein (244aa)
ROK family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF08_CONWI
ROK family protein
ROK family protein {ECO:0000313|EMBL:ADB51725.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_3619_8
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8664..8972
DNA (309bp) protein (103aa)
Transcriptional regulator, TetR family Tax=Streptomyces ipomoeae 91-03 RepID=L1KNX2_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EKX62254.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
TetR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_3619_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9130..9657
DNA (528bp) protein (176aa)
ArsC protein Tax=Halorhabdus tiamatea SARL4B RepID=U2F6D0_9EURY
protein tyrosine phosphatase
ArsC protein {ECO:0000313|EMBL:ERJ05790.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
PLM3_60_coex_sep16_scaffold_3619_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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9713..10948
DNA (1236bp) protein (412aa)
Glucose/sorbosone dehydrogenase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B203_STRRD
glucose/sorbosone dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3619_11
unknown

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comp(10954..11985)
DNA (1032bp) protein (344aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3619_12
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11982..12536)
DNA (555bp) protein (185aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037D3498
RNA polymerase {ECO:0000313|EMBL:AJE43652.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
ECF sigma factor
PLM3_60_coex_sep16_scaffold_3619_13
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12599..12787)
DNA (189bp) protein (63aa)
Uncharacterized protein Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YS34_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD59007.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying 13 items

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