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PLM3_60_coex_sep16_scaffold_9182

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_9182_1
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..191
DNA (189bp) protein (63aa)
Putative oxidoreductase Tax=Austwickia chelonae NBRC 105200 RepID=K6VU10_9MICO
D-amino acid oxidase
Uncharacterized protein {ECO:0000313|EMBL:AJO77061.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
PLM3_60_coex_sep16_scaffold_9182_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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200..634
DNA (435bp) protein (145aa)
PPOX class F420-dependent enzyme Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE488
F420-dependent protein
Putative F420-dependent enzyme {ECO:0000313|EMBL:AEA25797.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_9182_3
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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770..1549
DNA (780bp) protein (260aa)
RNA polymerase, sigma 28 subunit, FliA/WhiG family Tax=Frankia sp. (strain EAN1pec) RepID=A8L2N7_FRASN
FliA/WhiG family RNA polymerase sigma factor
RNA polymerase, sigma 28 subunit, FliA/WhiG family {ECO:0000313|EMBL:ABW10430.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_9182_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1565..2272
DNA (708bp) protein (236aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XFK4_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK35411.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_9182_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2286..3038
DNA (753bp) protein (251aa)
Putative esterase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AWH0_STRRD
esterase
Putative esterase {ECO:0000313|EMBL:ACZ86966.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_9182_6
unknown

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3125..3277
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_9182_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3299..5092
DNA (1794bp) protein (598aa)
Glycoside hydrolase 15-related protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B5N1_FRADG
glycoside hydrolase 15-like protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_60_coex_sep16_scaffold_9182_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5089..5211
DNA (123bp) protein (41aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTP3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28546.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_9182_9
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5443..6201
DNA (759bp) protein (253aa)
LysR family transcriptional regulator Tax=Actinopolymorpha alba RepID=UPI0003779A33
NmrA family transcriptional regulator
NmrA family transcriptional regulator {ECO:0000313|EMBL:AJK53241.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
PLM3_60_coex_sep16_scaffold_9182_10
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6447..7655
DNA (1209bp) protein (403aa)
Family 3 adenylate cyclase Tax=Rhizobium sp. CF122 RepID=J2IIS8_9RHIZ
Family 3 adenylate cyclase {ECO:0000313|EMBL:EJL48578.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
adenylate/guanylate cyclase
PLM3_60_coex_sep16_scaffold_9182_11
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7847..8239)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3BNW3_STRMB
Uncharacterized protein {ECO:0000313|EMBL:EMF01340.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
FAD-dependent monooxygenase
PLM3_60_coex_sep16_scaffold_9182_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8648..9544
DNA (897bp) protein (299aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
ATP-dependent zinc metalloprotease FtsH Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W0M8_9ACTO
ATP-dependent metalloprotease FtsH
PLM3_60_coex_sep16_scaffold_9182_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9499..10533
DNA (1035bp) protein (345aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
ATP-dependent zinc metalloprotease FtsH Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W0M8_9ACTO
ATP-dependent metalloprotease FtsH
PLM3_60_coex_sep16_scaffold_9182_14
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10688..11206)
DNA (519bp) protein (173aa)
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Peptide methionine sulfoxide reductase MsrA Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VPY7_9ACTO
PLM3_60_coex_sep16_scaffold_9182_15
unknown

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11617..11844
DNA (228bp) protein (76aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003682C99
PLM3_60_coex_sep16_scaffold_9182_16
unknown

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11952..12254
DNA (303bp) protein (101aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_9182_17
unknown

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comp(12291..12563)
DNA (273bp) protein (91aa)

This feature has no annotations

Displaying 17 items

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