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PLM3_60_coex_sep16_scaffold_4585

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4585_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3..1199)
DNA (1197bp) protein (399aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
arcA; arginine deiminase (EC:3.5.3.6)
Arginine deiminase Tax=Patulibacter medicamentivorans RepID=H0E1A9_9ACTN
PLM3_60_coex_sep16_scaffold_4585_2
Thermus sp. RL, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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1292..1729
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Thermus RepID=F6DDZ9_THETG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA39767.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. RL.;"
PLM3_60_coex_sep16_scaffold_4585_3
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1759..2271
DNA (513bp) protein (171aa)
hypothetical protein Tax=Streptomyces RepID=UPI00037A195F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ32879.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM3_60_coex_sep16_scaffold_4585_4
unknown

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comp(2279..2716)
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4585_5
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2767..3252)
DNA (486bp) protein (162aa)
Hydrolase Tax=Streptomyces sp. e14 RepID=D6KGW1_9ACTO
Hydrolase {ECO:0000313|EMBL:EFF88168.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
serine/threonine protein kinase
PLM3_60_coex_sep16_scaffold_4585_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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3385..4812
DNA (1428bp) protein (476aa)
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit bin=GWC2_Chloroflexi_73_18 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_4585_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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4809..5465
DNA (657bp) protein (219aa)
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit bin=GWC2_Chloroflexi_73_18 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_4585_8
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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5474..6883
DNA (1410bp) protein (470aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U9Q2_OCEP5
3-phosphoshikimate 1-carboxyvinyltransferase
PLM3_60_coex_sep16_scaffold_4585_9
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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6940..7353
DNA (414bp) protein (138aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y880_THEBD
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_60_coex_sep16_scaffold_4585_10
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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comp(7335..8357)
DNA (1023bp) protein (341aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GG20_9BACT bin=RBG9 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG9 organism_group=Chloroflexi
protein of unknown function DUF1006
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_60_coex_sep16_scaffold_4585_11
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8405..9718)
DNA (1314bp) protein (438aa)
hypothetical protein Tax=Mycobacterium sp. 141 RepID=UPI000378C2AD
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:EYT55276.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
amine oxidase
PLM3_60_coex_sep16_scaffold_4585_12
Paenibacillus darwinianus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9734..10072)
DNA (339bp) protein (113aa)
hypothetical protein Tax=Spirochaeta alkalica RepID=UPI00037123C9
glutamine amidotransferase
Glutamine amidotransferase {ECO:0000313|EMBL:EXX88108.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus darwinianus.;"
Displaying 12 items

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