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PLM3_60_coex_sep16_scaffold_2218

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2218_trna_1
unknown

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comp(352..425)
DNA (74bp)
transferRNA Undet
PLM3_60_coex_sep16_scaffold_2218_1
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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963..1589
DNA (627bp) protein (209aa)
hypothetical protein Tax=Frankia sp. BCU110501 RepID=UPI00036FD539
Uncharacterized protein {ECO:0000313|EMBL:KJE20267.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
short-chain dehydrogenase/reductase SDR
PLM3_60_coex_sep16_scaffold_2218_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1586..1846
DNA (261bp) protein (87aa)
hypothetical protein Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00037A7099
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23387.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_2218_3
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1933..2667)
DNA (735bp) protein (245aa)
Alpha/beta hydrolase fold protein Tax=Nocardioidaceae bacterium Broad-1 RepID=E9USF7_9ACTO
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EGD44087.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2218_4
unknown

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2766..2975
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2218_5
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3228..4346
DNA (1119bp) protein (373aa)
hypothetical protein Tax=Saccharopolyspora spinosa RepID=UPI000237A191
Uncharacterized protein {ECO:0000313|EMBL:EWT03165.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2218_6
unknown

Not on your lists

4356..4514
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2218_7
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(4448..4972)
DNA (525bp) protein (175aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI00038288F1
Uncharacterized protein {ECO:0000313|EMBL:EYB68627.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2218_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5016..5339)
DNA (324bp) protein (108aa)
GCN5-related N-acetyltransferase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ABQ3_THECD
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACY99076.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_60_coex_sep16_scaffold_2218_9
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5545..6543)
DNA (999bp) protein (333aa)
Beta-lactamase class B Tax=Amycolatopsis mediterranei RepID=D8HYP8_AMYMU
beta-lactamase class B
Beta-lactamase class B {ECO:0000313|EMBL:AEK45101.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM3_60_coex_sep16_scaffold_2218_10
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6703..9444
DNA (2742bp) protein (914aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003787ECF
Regulatory protein LuxR {ECO:0000313|EMBL:CDO87590.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
transcriptional regulator, luxR family
PLM3_60_coex_sep16_scaffold_2218_11
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9577..10344)
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYB5_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48378.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM3_60_coex_sep16_scaffold_2218_12
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10641..10976
DNA (336bp) protein (112aa)
Transcriptional regulator, LuxR family Tax=Rhodococcus sp. JVH1 RepID=J2JMZ1_9NOCA
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EJJ01738.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
ATPase-like protein
Displaying 13 items

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