ggKbase home page

PLM3_60_coex_sep16_scaffold_2268

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2268_1
unknown

Not on your lists

comp(3..131)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2268_2
unknown

Not on your lists

comp(134..424)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2268_trna_1
unknown

Not on your lists

685..757
DNA (73bp)
transferRNA Pro
PLM3_60_coex_sep16_scaffold_2268_3
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

835..1524
DNA (690bp) protein (230aa)
CDP-alcohol phosphatidyltransferase Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5Q8_CELGA
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:AEI12213.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
PLM3_60_coex_sep16_scaffold_2268_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1760..2782
DNA (1023bp) protein (341aa)
Mannose-1-phosphate guanyltransferase Tax=Actinomadura madurae LIID-AJ290 RepID=U2MRU1_9ACTO
phosphoglucomutase/phosphomannomutase family protein
Phosphoglucomutase/phosphomannomutase family protein {ECO:0000313|EMBL:ACZ86909.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_2268_5
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2779..4146
DNA (1368bp) protein (456aa)
mannose-1-phosphate guanyltransferase Tax=Nocardiopsis ganjiahuensis RepID=UPI0003829629
mannose-1-phosphate guanylyltransferase
Mannose-1-phosphate guanylyltransferase / phosphomannomutase {ECO:0000313|EMBL:AAZ55432.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
PLM3_60_coex_sep16_scaffold_2268_6
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

4264..6018
DNA (1755bp) protein (585aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003746428
VanW family protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
PLM3_60_coex_sep16_scaffold_2268_7
unknown

Not on your lists

5982..6161
DNA (180bp) protein (60aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2268_8
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6268..6648
DNA (381bp) protein (127aa)
Glycine cleavage system H protein Tax=Frankia sp. (strain EAN1pec) RepID=A8KY01_FRASN
glycine cleavage system protein H
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_2268_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6766..7260
DNA (495bp) protein (165aa)
FHA domain-containing protein-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AV48_STRRD
FHA domain-containing protein
FHA domain-containing protein-like protein {ECO:0000313|EMBL:ACZ86910.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_2268_10
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7257..8150
DNA (894bp) protein (298aa)
MerR family transcriptional regulator Tax=Salinispora arenicola RepID=UPI00037C1867
regulatory protein MerR
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61936.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
PLM3_60_coex_sep16_scaffold_2268_11
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

8183..9586
DNA (1404bp) protein (468aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM90_DESK7
Tax=RBG_13_Actinobacteria_55_18_curated
PLM3_60_coex_sep16_scaffold_2268_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9621..10340
DNA (720bp) protein (240aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
hypoxanthine phosphoribosyltransferase Tax=Patulibacter americanus RepID=UPI0003B760F5
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2268_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

10458..10928
DNA (471bp) protein (157aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI0002F7E851
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2268_14
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11075..11620
DNA (546bp) protein (182aa)
Transcriptional regulator, MerR family Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UVI3_9ACTO
transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AIY19908.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
PLM3_60_coex_sep16_scaffold_2268_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11629..12237
DNA (609bp) protein (203aa)
hypothetical protein bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2268_16
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

12429..13832
DNA (1404bp) protein (468aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniformans ATCC BAA-1850.;"
glycine dehydrogenase (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L4I5_9BACT
PLM3_60_coex_sep16_scaffold_2268_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13829..15421
DNA (1593bp) protein (531aa)
glycine dehydrogenase subunit beta (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SL71_THEM7
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2268_18
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15528..16526
DNA (999bp) protein (333aa)
Polyphosphate:nucleotide phosphotransferase, PPK2 family Tax=Crinalium epipsammum PCC 9333 RepID=K9VUW2_9CYAN
polyphosphate:nucleotide phosphotransferase
Polyphosphate:nucleotide phosphotransferase, PPK2 family {ECO:0000313|EMBL:AFZ11746.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
PLM3_60_coex_sep16_scaffold_2268_19
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16566..16694
DNA (129bp) protein (43aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI00034DBCDE
T-RNA-processing ribonuclease BN {ECO:0000313|EMBL:GAN78141.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ribonuclease BN
Displaying 20 items

View Taxonomy