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PLM3_60_coex_sep16_scaffold_2582

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2582_1
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1..381
DNA (381bp) protein (127aa)
Putative glycosyl transferase Tax=Frankia alni (strain ACN14a) RepID=Q0RRC2_FRAAA
glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEH08554.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_2582_2
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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410..1609
DNA (1200bp) protein (400aa)
glycosyl transferase family 1 Tax=Frankia sp. BCU110501 RepID=UPI000381CDCA
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ABW15239.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_2582_3
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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1606..2772
DNA (1167bp) protein (389aa)
Glycosyltransferase, group 1 family protein Tax=Actinomyces sp. oral taxon 877 str. F0543 RepID=U1SP12_9ACTO
group 1 glycosyl transferase
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ERH32377.1}; species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 877 str. F0543.;"
PLM3_60_coex_sep16_scaffold_2582_4
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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2769..3887
DNA (1119bp) protein (373aa)
Glycosyl transferase group 1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C274_SPHTD
Glycosyl transferase family 1 {ECO:0000313|EMBL:KGH48120.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
group 1 glycosyl transferase
PLM3_60_coex_sep16_scaffold_2582_5
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4269..5402
DNA (1134bp) protein (378aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8G6_CONWI
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KJK45954.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM3_60_coex_sep16_scaffold_2582_6
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5399..5989)
DNA (591bp) protein (197aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000378B019
Uncharacterized protein {ECO:0000313|EMBL:EQD84011.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2582_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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6165..8594
DNA (2430bp) protein (810aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EFA8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83370.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2582_8
BJP_IG2158_Actinobacteria_57_21, Bacteria

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8737..9855
DNA (1119bp) protein (373aa)
Nucleotidyl transferase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NP37_ROSCS
nucleotidyl transferase
Tax=BJP_IG2158_Actinobacteria_57_21
PLM3_60_coex_sep16_scaffold_2582_9
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9989..10840)
DNA (852bp) protein (284aa)
alpha/beta hydrolase Tax=Frankia sp. Iso899 RepID=UPI0003B579CB
LigA protein {ECO:0000313|EMBL:EWM16425.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
alpha/beta hydrolase
PLM3_60_coex_sep16_scaffold_2582_10
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10902..11348)
DNA (447bp) protein (149aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003804D19
Uncharacterized protein {ECO:0000313|EMBL:KIM17517.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;"
4-oxalocrotonate tautomerase family protein
PLM3_60_coex_sep16_scaffold_2582_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(11448..12701)
DNA (1254bp) protein (418aa)
Major facilitator superfamily Tax=Patulibacter medicamentivorans RepID=H0EC58_9ACTN
Major facilitator superfamily {ECO:0000313|EMBL:EHN08730.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
major facilitator superfamily protein
PLM3_60_coex_sep16_scaffold_2582_12
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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12795..13244
DNA (450bp) protein (150aa)
HxlR family transcriptional regulator Tax=Rhodococcus opacus M213 RepID=K8X7N3_RHOOP
HxlR family transcriptional regulator {ECO:0000313|EMBL:EKT76821.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
HxlR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_2582_13
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13640..14134
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF98190.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
PLM3_60_coex_sep16_scaffold_2582_14
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(14390..15082)
DNA (693bp) protein (231aa)
Two-component system, response regulator of the LuxR family Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K5V8_SACES
Two-component system, response regulator of the LuxR family
Two-component system, response regulator of the LuxR family {ECO:0000313|EMBL:CCH35640.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3_60_coex_sep16_scaffold_2582_15
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15179..16378)
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KFV8_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH35639.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3_60_coex_sep16_scaffold_2582_16
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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16645..17208
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MS46_9ACTO
Membrane protein {ECO:0000313|EMBL:KJS62654.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
hypothetical protein
Displaying 16 items

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