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PLM3_60_coex_sep16_scaffold_2611

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2611_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..228
DNA (228bp) protein (76aa)
Helix-turn-helix, HxlR type Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCF7_NOCSJ
helix-turn-helix, HxlR type
Helix-turn-helix, HxlR type {ECO:0000313|EMBL:ABL79492.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_60_coex_sep16_scaffold_2611_2
unknown

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310..639
DNA (330bp) protein (110aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2611_3
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1045..2028)
DNA (984bp) protein (328aa)
Mg2+/Co2+ transporter Tax=Frankia sp. QA3 RepID=I9A9Y3_9ACTO
Mg2+/Co2+ transporter {ECO:0000313|EMBL:EIV96356.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
Mg2 transporter protein CorA
PLM3_60_coex_sep16_scaffold_2611_4
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2467..2607)
DNA (141bp) protein (47aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q289_KRIFD
PLM3_60_coex_sep16_scaffold_2611_5
GWA1_OD1_46_11_plus_minus, Nomurabacteria, Parcubacteria, Bacteria

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comp(3078..3422)
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EKX7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU22433.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_46_11.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2611_6
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3598..3819
DNA (222bp) protein (74aa)
Transposase IS4 family protein Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PGY6_STRVO
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEM88700.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM3_60_coex_sep16_scaffold_2611_7
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3828..4268
DNA (441bp) protein (147aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00036AF354
hypothetical protein
Transposase IS4 family protein {ECO:0000313|EMBL:AHH97289.1}; Uncharacterized protein {ECO:0000313|EMBL:AHH98034.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM3_60_coex_sep16_scaffold_2611_8
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4287..4922)
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W2L8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY43749.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens JCM 14089.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2611_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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5053..5595
DNA (543bp) protein (181aa)
Acetyltransferase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ASS5_STRRD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ACZ90402.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_2611_10
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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5944..9339
DNA (3396bp) protein (1132aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036999DA
Uncharacterized protein {ECO:0000313|EMBL:KKD01097.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium halotolerans.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2611_11
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9573..10757)
DNA (1185bp) protein (395aa)
hypothetical protein Tax=Streptomyces sp. CNS615 RepID=UPI0003729C96
Uncharacterized protein {ECO:0000313|EMBL:KFF94916.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
pentapeptide repeat-containing protein
PLM3_60_coex_sep16_scaffold_2611_12
unknown

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comp(11082..11642)
DNA (561bp) protein (187aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2611_13
unknown

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12503..13207
DNA (705bp) protein (235aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2611_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(13334..14611)
DNA (1278bp) protein (426aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXH0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84903.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Two component signal transduction histidine kinase
PLM3_60_coex_sep16_scaffold_2611_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(15073..15417)
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Gordonia soli NBRC 108243 RepID=M0QHC7_9ACTO
integral membrane protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 15 items

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