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PLM3_60_coex_sep16_scaffold_2653

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2653_1
unknown

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comp(2..175)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2653_2
unknown

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235..384
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2653_3

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627..1673
DNA (1047bp) protein (349aa)
Marine sediment metagenome DNA, contig: S12H4_L03679 {ECO:0000313|EMBL:GAI83148.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_60_coex_sep16_scaffold_2653_4
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1777..2628
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=Frankia alni (strain ACN14a) RepID=Q0REQ6_FRAAA
Diacylglycerol kinase {ECO:0000313|EMBL:EWT01926.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2653_5
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2741..3055
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=G0FVZ9_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK43936.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM3_60_coex_sep16_scaffold_2653_6
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3073..4626
DNA (1554bp) protein (518aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CCH79439.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CCH79439.1};; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
lcfB; Long-chain-fatty-acid-CoA ligase (EC:6.2.1.3)
hypothetical protein Tax=Smaragdicoccus niigatensis RepID=UPI000365B4A7
PLM3_60_coex_sep16_scaffold_2653_7
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4623..5210
DNA (588bp) protein (196aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Adenylate kinase Tax=Modestobacter marinus (strain BC501) RepID=I4EWS6_MODMB
PLM3_60_coex_sep16_scaffold_2653_8
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5207..6913
DNA (1707bp) protein (569aa)
hypothetical protein Tax=Smaragdicoccus niigatensis RepID=UPI000373D6F5
poly(3-hydroxyalkanoate) polymerase
Polyhydroxyalkanoic acid synthase {ECO:0000313|EMBL:AIY19060.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
PLM3_60_coex_sep16_scaffold_2653_9
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6927..8111
DNA (1185bp) protein (395aa)
Acyl-coenzyme A oxidase 4, peroxisomal {ECO:0000313|EMBL:CCH78301.1}; EC=1.3.3.6 {ECO:0000313|EMBL:CCH78301.1};; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein Tax=Demetria terragena RepID=UPI00036D5C6D
glutaryl-CoA dehydrogenase
PLM3_60_coex_sep16_scaffold_2653_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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8092..8958
DNA (867bp) protein (289aa)
Poly(3-hydroxyalkanoate) depolymerase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S467_GEOOG
poly(3-hydroxyalkanoate) depolymerase
Poly(3-hydroxyalkanoate) depolymerase {ECO:0000313|EMBL:ADB75057.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_2653_11
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8964..9527
DNA (564bp) protein (188aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CCH19317.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CCH19317.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L670_9ACTO
PLM3_60_coex_sep16_scaffold_2653_12
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9736..9996
DNA (261bp) protein (87aa)
Putative uncharacterized protein Tax=Frankia sp. (strain CcI3) RepID=Q2JA91_FRASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDA42748.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
Displaying 12 items

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