ggKbase home page

PLM3_60_coex_sep16_scaffold_2779

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2779_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..268)
DNA (267bp) protein (89aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00038035F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ90149.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_2779_2
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

324..683
DNA (360bp) protein (120aa)
hypothetical protein Tax=Promicromonospora sukumoe RepID=UPI00036D9B99
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW11073.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_2779_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(680..1348)
DNA (669bp) protein (223aa)
two component LuxR family transcriptional regulator bin=bin8_Chloro species=Streptomyces bingchenggensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
DNA-binding response regulator
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_2779_4
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1531..2862)
DNA (1332bp) protein (444aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IKY3_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62378.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2779_5
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2879..4498)
DNA (1620bp) protein (540aa)
Putative peptidase Tax=planctomycete KSU-1 RepID=I3IKY2_9PLAN
Putative peptidase {ECO:0000313|EMBL:GAB62377.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
peptidase S8/S53 subtilisin kexin sedolisin
PLM3_60_coex_sep16_scaffold_2779_6
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(4540..6138)
DNA (1599bp) protein (533aa)
Tfp pilus assembly protein PilF Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJX6_CHLTF
Tfp pilus assembly protein PilF
Tfp pilus assembly protein PilF {ECO:0000313|EMBL:AEP13143.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM3_60_coex_sep16_scaffold_2779_7
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6185..7294)
DNA (1110bp) protein (370aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI000360DFDB
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
PLM3_60_coex_sep16_scaffold_2779_8
unknown

Not on your lists

7763..8374
DNA (612bp) protein (204aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2779_9
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8436..9110)
DNA (675bp) protein (225aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI00037B7C44
Transposase {ECO:0000313|EMBL:EME65645.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
transposase
PLM3_60_coex_sep16_scaffold_2779_10
unknown

Not on your lists

comp(9171..9455)
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2779_11

Not on your lists

comp(9477..9761)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6H7G1_9ACTO
Marine sediment metagenome DNA, contig: S01H1_S08349 {ECO:0000313|EMBL:GAG07869.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying 11 items

View Taxonomy