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PLM3_60_coex_sep16_scaffold_2957

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2957_1
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2..310
DNA (309bp) protein (103aa)
sugar ABC transporter permease Tax=Actinopolymorpha alba RepID=UPI000363667B
Uncharacterized protein {ECO:0000313|EMBL:EST38352.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
binding-protein-dependent transport systems inner membrane component
PLM3_60_coex_sep16_scaffold_2957_2
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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319..1407
DNA (1089bp) protein (363aa)
Glycosidase Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L3U1_9ACTO
Glycosidase {ECO:0000313|EMBL:EST38351.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
glycosidase-like protein
PLM3_60_coex_sep16_scaffold_2957_3
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1453..2106)
DNA (654bp) protein (218aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase (EC:2.1.1.-)
ubiquinone/menaquinone biosynthesis methyltransferase Tax=Actinoplanes globisporus RepID=UPI00037F227A
PLM3_60_coex_sep16_scaffold_2957_4
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2107..2757)
DNA (651bp) protein (217aa)
AsnC family transcriptional regulator Tax=Amycolatopsis nigrescens RepID=UPI0003640B99
Lrp/AsnC-family transcriptional regulator, leucine-responsive regulatory protein {ECO:0000313|EMBL:EWM15456.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2957_5
unknown

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2759..2884
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2957_6
unknown

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3022..3570
DNA (549bp) protein (183aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2957_7
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3567..3878
DNA (312bp) protein (104aa)
hypothetical protein Tax=Streptomyces sp. LaPpAH-108 RepID=UPI00037E5600
MarR family transcriptional regulator {ECO:0000313|EMBL:KJY30471.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2957_8
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3889..4869)
DNA (981bp) protein (327aa)
cytochrome C biogenesis protein Tax=Frankia sp. BCU110501 RepID=UPI00035ED851
cytochrome c assembly protein
Cytochrome c assembly protein {ECO:0000313|EMBL:ABW15461.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_2957_9
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4882..6519)
DNA (1638bp) protein (546aa)
Cytochrome c biogenesis protein ResB Tax=Kineosphaera limosa NBRC 100340 RepID=K6WB60_9MICO
Cytochrome c biogenesis protein ResB {ECO:0000313|EMBL:GAB96465.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
cytochrome c biogenesis membrane protein
PLM3_60_coex_sep16_scaffold_2957_10
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6531..7304)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Streptomyces sp. HPH0547 RepID=S3AL97_9ACTO
Cytochrome C biogenesis protein ResC {ECO:0000313|EMBL:KHL02155.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
cytochrome c biogenesis protein transmembrane region
PLM3_60_coex_sep16_scaffold_2957_11
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7301..7933)
DNA (633bp) protein (211aa)
Secreted protein Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X6X3_STRVR
Secreted protein {ECO:0000313|EMBL:EFL34040.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
Redoxin domain-containing protein
PLM3_60_coex_sep16_scaffold_2957_12
unknown

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8154..8495
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2957_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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8517..8873
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z5R8_9ACTN
putative 4Fe-4S ferredoxin
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2957_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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8900..9685
DNA (786bp) protein (262aa)
Putative menaquinol-cytochrome c reductase cytochrome b subunit Tax=Ilumatobacter coccineus YM16-304 RepID=M5AGV0_9ACTN
putative menaquinol-cytochrome c reductase cytochrome b subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2957_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9701..10618
DNA (918bp) protein (306aa)
Putative menaquinol-cytochrome c reductase cytochrome b subunit Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZX02_9ACTN
putative menaquinol-cytochrome c reductase cytochrome b subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2957_16
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10630..11028
DNA (399bp) protein (133aa)
hypothetical protein Tax=actinobacterium SCGC AAA015-D07 RepID=UPI00037EE6E7
Uncharacterized protein {ECO:0000313|EMBL:KGA07286.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
Displaying 16 items

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