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PLM3_60_coex_sep16_scaffold_8892

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_8892_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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3..728
DNA (726bp) protein (242aa)
Ribosome-binding ATPase YchF Tax=Selenomonas sp. F0473 RepID=K9D3Y5_9FIRM
GTP-binding protein YchF
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_8892_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(755..1306)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTE2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72046.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
PLM3_60_coex_sep16_scaffold_8892_3
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1385..1633)
DNA (249bp) protein (83aa)
ThiS family protein Tax=Plesiocystis pacifica SIR-1 RepID=A6GIG1_9DELT
ThiS family protein {ECO:0000313|EMBL:EDM74324.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
MoaD family protein
PLM3_60_coex_sep16_scaffold_8892_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1642..2565)
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FA91_SACEN bin=16ft_combo_ws3_JS1 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_8892_5
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2668..3921)
DNA (1254bp) protein (418aa)
amine oxidase, flavin-containing Tax=Gemmata obscuriglobus RepID=UPI00016C4941
Amine oxidase {ECO:0000313|EMBL:KFA88868.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
oxidoreductase, FAD-binding
PLM3_60_coex_sep16_scaffold_8892_6
R_NC10_66_22, NC10, Bacteria

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comp(3924..4919)
DNA (996bp) protein (332aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Actinomadura madurae LIID-AJ290 RepID=U2N536_9ACTO
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_8892_7
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4961..5461
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Halobacterium salinarum RepID=B0R5F2_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG19687.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1); (Halobacterium halobium).;"
PLM3_60_coex_sep16_scaffold_8892_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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5451..6968
DNA (1518bp) protein (506aa)
Membrane-flanked domain Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYV8_RUBXD
membrane-flanked domain-containing protein
Membrane-flanked domain {ECO:0000313|EMBL:ABG03420.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_8892_9
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6922..7194)
DNA (273bp) protein (91aa)
Anti-sigma factor Tax=Modestobacter marinus (strain BC501) RepID=I4F269_MODMB
Possible anti-sigma factor {ECO:0000313|EMBL:CEL18698.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_8892_10
unknown

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comp(7161..7361)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 10 items

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