ggKbase home page

PLM3_60_coex_sep16_scaffold_1230

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1230_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..874
DNA (873bp) protein (291aa)
Type II secretion system protein E Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RD47_AMMDK
type II secretion system protein E
Tax=BJP_08E140C01_Burkholderiales_65_30
PLM3_60_coex_sep16_scaffold_1230_2
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

912..1616
DNA (705bp) protein (235aa)
Putative membrane protein Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKI8_BORPD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAP42419.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
PLM3_60_coex_sep16_scaffold_1230_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1613..2416
DNA (804bp) protein (268aa)
Flp pilus assembly protein TadC Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBN5_9FIRM
Type II secretion system F domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_1230_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

2520..2870
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EDF2_9CHLR
cupin domain-containing protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_1230_5
unknown

Not on your lists

3100..3999
DNA (900bp) protein (300aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1230_6
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4228..4587)
DNA (360bp) protein (120aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI0003628542
Signal peptidase I {ECO:0000313|EMBL:KKD04303.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1230_7
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4587..6068)
DNA (1482bp) protein (494aa)
hypothetical protein Tax=Mycobacterium abscessus RepID=UPI00034938E3
Uncharacterized protein {ECO:0000313|EMBL:KGI80609.1}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1230_8
unknown

Not on your lists

6838..7119
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1230_9
unknown

Not on your lists

7116..7907
DNA (792bp) protein (264aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1230_10
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7904..10213
DNA (2310bp) protein (770aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ84072.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
PLM3_60_coex_sep16_scaffold_1230_11
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10433..10717
DNA (285bp) protein (95aa)
Putative endonuclease Tax=Clostridium sp. BNL1100 RepID=H2JEL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:GAM50579.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
putative endonuclease
PLM3_60_coex_sep16_scaffold_1230_12
unknown

Not on your lists

comp(10764..10865)
DNA (102bp) protein (34aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1230_13

Not on your lists

11330..11740
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WAL3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKM13816.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1230_14
unknown

Not on your lists

11816..12073
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1230_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12146..12550
DNA (405bp) protein (135aa)
single-stranded DNA-binding protein Tax=Nocardioides sp. Iso805N RepID=UPI00036A98BD
single-stranded DNA-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1230_16
unknown

Not on your lists

12627..12830
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1230_17
unknown

Not on your lists

12827..13096
DNA (270bp) protein (90aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1230_18
unknown

Not on your lists

13105..13374
DNA (270bp) protein (90aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1230_19
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13489..14157
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS47_KRIFD
Uncharacterized protein {ECO:0000313|EMBL:GAM46116.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1230_20
unknown

Not on your lists

14247..14573
DNA (327bp) protein (109aa)

This feature has no annotations

Displaying 20 items

View Taxonomy