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PLM3_60_coex_sep16_scaffold_1255

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1255_1
Weissella paramesenteroides, Weissella, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2..385
DNA (384bp) protein (128aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Weissella.;" source="Weissella paramesenteroides ATCC 33313.;"
Ribosomal RNA small subunit methyltransferase G Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R9C1_WEIPA
rsmG; Ribosomal RNA small subunit methyltransferase G
PLM3_60_coex_sep16_scaffold_1255_2
unknown

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comp(920..2083)
DNA (1164bp) protein (388aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1255_3
unknown

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comp(2056..2307)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1255_4
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2369..3424
DNA (1056bp) protein (352aa)
ATPase involved in chromosome partitioning Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RMC6_MYCRN
chromosome partitioning ATPase
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AEV72423.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM3_60_coex_sep16_scaffold_1255_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3424..4476
DNA (1053bp) protein (351aa)
ParB-like partition protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXW7_PSEUX
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AEA28773.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_1255_6
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4510..5457)
DNA (948bp) protein (316aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
D-alanine--D-alanine ligase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F5B8_VERMA
D-alanine--D-alanine ligase
PLM3_60_coex_sep16_scaffold_1255_7
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5454..6746)
DNA (1293bp) protein (431aa)
Putative transcriptional regulator, GntR family Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q5P9_CATAD
GntR family transcriptional regulator
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:ACU77860.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_60_coex_sep16_scaffold_1255_8
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6963..7598
DNA (636bp) protein (212aa)
hypothetical protein Tax=Saccharopolyspora spinosa RepID=UPI00023792E0
GCN5 family acetyltransferase {ECO:0000313|EMBL:KEI44676.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1255_9
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7811..8137)
DNA (327bp) protein (109aa)
Thioredoxin Tax=Frankia sp. (strain EAN1pec) RepID=A8L8V1_FRASN
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_1255_10
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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comp(8230..9213)
DNA (984bp) protein (328aa)
Thioredoxin reductase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBG9_THET1
thioredoxin reductase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3_60_coex_sep16_scaffold_1255_11
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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9347..9838
DNA (492bp) protein (164aa)
Putative membrane protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L050_THERP
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
PLM3_60_coex_sep16_scaffold_1255_12
unknown

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comp(9863..10714)
DNA (852bp) protein (284aa)
hypothetical protein
PLM3_60_coex_sep16_scaffold_1255_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(10722..11381)
DNA (660bp) protein (220aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WGM1_KINRD
ECF family RNA polymerase sigma-24 subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1255_14
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(11378..12883)
DNA (1506bp) protein (502aa)
Putative Serine/threonine protein kinase PrkC regulator of stationary phase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0X8_9ACTN
Putative Serine/threonine protein kinase PrkC regulator of stationary phase {ECO:0000313|EMBL:CCM62267.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
serine/threonine protein kinase
PLM3_60_coex_sep16_scaffold_1255_15
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12966..14069)
DNA (1104bp) protein (368aa)
NLP/P60 protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A553_THECD
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ACZ00039.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_60_coex_sep16_scaffold_1255_16
unknown

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comp(14376..14483)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 16 items

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