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PLM3_60_coex_sep16_scaffold_1388

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1388_1
unknown

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2..139
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1388_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(194..1405)
DNA (1212bp) protein (404aa)
peptide hydrolase Tax=Streptomyces vitaminophilus RepID=UPI00037108BE
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_1388_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1921..2622
DNA (702bp) protein (234aa)
ybbO; Uncharacterized oxidoreductase ybbO (EC:1.-.-.-)
Uncharacterized protein Tax=Congregibacter litoralis KT71 RepID=A4A7Q2_9GAMM
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:AKF09462.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
PLM3_60_coex_sep16_scaffold_1388_4
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2619..4037)
DNA (1419bp) protein (473aa)
Putative uncharacterized protein bin=GWD2_Desulfuromonadales_54_10 species=Cellulomonas fimi genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47450.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
PLM3_60_coex_sep16_scaffold_1388_5
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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4293..6449
DNA (2157bp) protein (719aa)
PAS fold family Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VY11_9CYAN
PAS fold family {ECO:0000313|EMBL:EDX73110.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
PLM3_60_coex_sep16_scaffold_1388_6
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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6497..7117
DNA (621bp) protein (207aa)
RNA polymerase sigma factor Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SZ39_MICAI
sigma-70 family RNA polymerase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_1388_7
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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7114..7950
DNA (837bp) protein (279aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000377AAE2
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_1388_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(7960..9390)
DNA (1431bp) protein (477aa)
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000255|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000255|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000255|HAMAP-Rule:MF_00006}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Argininosuccinate lyase Tax=Frankia sp. CN3 RepID=G6HPC2_9ACTO
PLM3_60_coex_sep16_scaffold_1388_9
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9434..10657)
DNA (1224bp) protein (408aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZQ5_9FIRM
PLM3_60_coex_sep16_scaffold_1388_10
marine actinobacterium MedAcidi-G1, Actinobacteria, Actinobacteria, Bacteria

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comp(10654..11166)
DNA (513bp) protein (171aa)
Arginine repressor Tax=Bacteria RepID=E0XSC8_9ACTN
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G1.;"
argR; arginine repressor
PLM3_60_coex_sep16_scaffold_1388_11
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11157..12416)
DNA (1260bp) protein (420aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
Acetylornithine aminotransferase Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PDP6_STRVO
acetylornithine/succinyldiaminopimelate aminotransferase
PLM3_60_coex_sep16_scaffold_1388_12
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(12413..13360)
DNA (948bp) protein (316aa)
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Acetylglutamate kinase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A1J5_9ACTN
PLM3_60_coex_sep16_scaffold_1388_13
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(13434..14768)
DNA (1335bp) protein (445aa)
N-acetylglutamate synthase Tax=Streptomyces somaliensis RepID=UPI00029AE1F7
N-acetylglutamate synthase {ECO:0000313|EMBL:AKH81430.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
glutamate N-acetyltransferase
PLM3_60_coex_sep16_scaffold_1388_14
uncultured Verrucomicrobiales bacterium HF0070_30L02, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(14765..15823)
DNA (1059bp) protein (353aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; environmental samples.;" source="uncultured Verrucomicrobiales bacterium HF0070_30L02.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase Tax=Bacteria RepID=E0XSC3_9ACTN
PLM3_60_coex_sep16_scaffold_1388_15
unknown

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15974..16036
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 15 items

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