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PLM3_60_coex_sep16_scaffold_1483

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1483_1
unknown

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1..129
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1483_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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473..3859
DNA (3387bp) protein (1129aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UE3_SOLUE
serine/threonine protein kinase
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_60_coex_sep16_scaffold_1483_3
unknown

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3942..4175
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1483_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(4133..4327)
DNA (195bp) protein (65aa)
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6H3B5_9ACTO
putative transposase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1483_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(4305..4676)
DNA (372bp) protein (124aa)
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6HF82_9ACTO
putative transposase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1483_6
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4657..4929)
DNA (273bp) protein (91aa)
Integrase catalytic region Tax=Frankia sp. (strain EAN1pec) RepID=A8LBT3_FRASN
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ABW12451.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_1483_7
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5015..5332)
DNA (318bp) protein (106aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000369E722
transposase
Putative transposase TnpA {ECO:0000313|EMBL:CAH69516.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni.;"
PLM3_60_coex_sep16_scaffold_1483_8
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5305..5670)
DNA (366bp) protein (122aa)
Integrase catalytic region Tax=Frankia sp. (strain EAN1pec) RepID=A8LH39_FRASN
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ABW12810.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_1483_9
unknown

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comp(5828..6295)
DNA (468bp) protein (156aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1483_10
Streptomyces sp. W007, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6466..6900)
DNA (435bp) protein (145aa)
hypothetical protein Tax=Streptomyces sp. CNB091 RepID=UPI0003755D34
MarR family transcriptional regulator {ECO:0000313|EMBL:EHM24338.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. W007.;"
MarR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_1483_11
unknown

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7380..7916
DNA (537bp) protein (179aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1483_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8212..9438
DNA (1227bp) protein (409aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:EHN11204.1}; EC=6.5.1.1 {ECO:0000313|EMBL:EHN11204.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
DNA ligase Tax=Frankia sp. Iso899 RepID=UPI0003B4AF4D
putative DNA ligase
PLM3_60_coex_sep16_scaffold_1483_13
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9467..10588)
DNA (1122bp) protein (374aa)
3-phytase (EC:3.1.3.8)
Putative 3-phytase Tax=Streptomyces aurantiacus JA 4570 RepID=S4A7N7_9ACTO
Putative 3-phytase {ECO:0000313|EMBL:EPH46810.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
PLM3_60_coex_sep16_scaffold_1483_14
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10851..11198
DNA (348bp) protein (116aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00036CA86A
Uncharacterized protein {ECO:0000313|EMBL:KIA60463.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
putative transposase
PLM3_60_coex_sep16_scaffold_1483_15
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11213..12145
DNA (933bp) protein (311aa)
Integrase, catalytic region Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1THS3_MYCVP
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABM16723.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1).;"
PLM3_60_coex_sep16_scaffold_1483_16
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12103..12279)
DNA (177bp) protein (59aa)
Putative major facilitator superfamily (MFS) transporter Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UPX9_9ACTO
MFS transporter permease {ECO:0000313|EMBL:KJR11432.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
MFS transporter permease
PLM3_60_coex_sep16_scaffold_1483_17
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12503..13129
DNA (627bp) protein (209aa)
Dihydrofolate reductase Tax=Saccharomonospora cyanea NA-134 RepID=H5XNB4_9PSEU
Dihydrofolate reductase {ECO:0000313|EMBL:EHR63747.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
dihydrofolate reductase
Displaying 17 items

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