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PLM3_60_coex_sep16_scaffold_1704

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1704_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1627)
DNA (1626bp) protein (542aa)
4-hydroxybenzoyl-CoA reductase alpha/gamma subunit (HcrC/hcrA) Tax=Sulfobacillus acidophilus RepID=F8I9A2_SULAT
ygeS; 4-hydroxybenzoyl-CoA reductase alpha/gamma subunit (hcrC/hcrA)
4-hydroxybenzoyl-CoA reductase alpha/gamma subunit (HcrC/hcrA) {ECO:0000313|EMBL:AEJ40192.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain TPY).;"
PLM3_60_coex_sep16_scaffold_1704_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1650..3605)
DNA (1956bp) protein (652aa)
ATPase associated with various cellular activities AAA_5 Tax=Sulfobacillus acidophilus RepID=F8I9A3_SULAT
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:AEJ40193.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain TPY).;"
PLM3_60_coex_sep16_scaffold_1704_3
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3687..4466
DNA (780bp) protein (260aa)
Transcriptional regulator, GntR family Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B120_PARDP
GntR family transcriptional regulator {ECO:0000313|EMBL:KJS41662.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
GntR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_1704_4
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4770..5588
DNA (819bp) protein (273aa)
Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CDY78908.1}; EC=6.3.5.6 {ECO:0000313|EMBL:CDY78908.1};; EC=6.3.5.7 {ECO:0000313|EMBL:CDY78908.1};; Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:KDR39117.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
amidase (EC:3.5.1.4)
Amidase Tax=Burkholderia terrae BS001 RepID=I5D2H8_9BURK
PLM3_60_coex_sep16_scaffold_1704_5
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5719..7017)
DNA (1299bp) protein (433aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035C0E72
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL86956.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_60_coex_sep16_scaffold_1704_6
unknown

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comp(8204..8935)
DNA (732bp) protein (244aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1704_7
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9628..9876
DNA (249bp) protein (83aa)
Putative sugar phosphatase of HAD superfamily Tax=Saccharomonospora glauca K62 RepID=I1D6Q5_9PSEU
Putative sugar phosphatase of HAD superfamily {ECO:0000313|EMBL:EIF00630.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
putative sugar phosphatase of HAD superfamily
PLM3_60_coex_sep16_scaffold_1704_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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9948..10502
DNA (555bp) protein (185aa)
Putative NagD-like phosphatase Actinobacterial subfamily Tax=Patulibacter medicamentivorans RepID=H0E434_9ACTN
Putative NagD-like phosphatase Actinobacterial subfamily {ECO:0000313|EMBL:EHN11569.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
HAD-superfamily hydrolase
PLM3_60_coex_sep16_scaffold_1704_9
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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10899..11141
DNA (243bp) protein (81aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI0003633194
putative transposase
Putative transposase {ECO:0000313|EMBL:ABW12274.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_1704_10
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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11159..11314
DNA (156bp) protein (52aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000369E722
transposase
Putative transposase {ECO:0000313|EMBL:ABD13515.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM3_60_coex_sep16_scaffold_1704_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11239..12405)
DNA (1167bp) protein (389aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B992_STRRD
Uncharacterized protein {ECO:0000313|EMBL:ACZ91637.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
transcriptional activator protein traR
PLM3_60_coex_sep16_scaffold_1704_12
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12582..12815)
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Tetrasphaera elongata Lp2 RepID=N0E283_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH69891.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
AsnC family transcriptional regulator
PLM3_60_coex_sep16_scaffold_1704_13
unknown

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13103..13339
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1704_14
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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13558..13878
DNA (321bp) protein (107aa)
Transposase orfA IS3/IS911 family Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BSE8_9GAMM
ISXoc2 transposase, IS3 family
Tax=RBG_16_Acidobacteria_64_8_curated
PLM3_60_coex_sep16_scaffold_1704_15
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

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13875..14783
DNA (909bp) protein (303aa)
Transposase orfB IS3/IS911 family Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CEW8_9GAMM
Integrase catalytic domain-containing protein
Tax=RBG_13_Actinobacteria_55_18_curated
PLM3_60_coex_sep16_scaffold_1704_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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14880..15089
DNA (210bp) protein (70aa)
Transposase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U867_9CHLR
Transposase {ECO:0000313|EMBL:EFH80078.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PLM3_60_coex_sep16_scaffold_1704_17

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15086..15337
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0W0_CALAS
Marine sediment metagenome DNA, contig: S01H4_S10370 {ECO:0000313|EMBL:GAH01637.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1704_18
RIFOXYC2_FULL_Syntrophobacterales_60_23_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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15388..15663
DNA (276bp) protein (92aa)
Transposase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJ15_9CHLR
hypothetical protein
Tax=RIFOXYC2_FULL_Syntrophobacterales_60_23_curated
PLM3_60_coex_sep16_scaffold_1704_19
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15744..16502
DNA (759bp) protein (253aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00037F17DF
Uncharacterized protein {ECO:0000313|EMBL:CEL15647.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1704_20
unknown

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17243..17356
DNA (114bp) protein (38aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1704_21

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17353..17676
DNA (324bp) protein (108aa)
Methyltransferase type 12 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022U7_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:KKL73969.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
type 12 methyltransferase
Displaying 21 items

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