ggKbase home page

PLM3_60_coex_sep16_scaffold_1738

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1738_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

3..131
DNA (129bp) protein (43aa)
Peptidase S15 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATB1_RUBXD
peptidase S15
Peptidase S15 {ECO:0000313|EMBL:ABG05367.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1738_2
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(359..1921)
DNA (1563bp) protein (521aa)
BNR repeat-like domain protein Tax=Burkholderia thailandensis RepID=N0AN76_BURTH
BNR repeat-like domain protein
BNR repeat-like domain protein {ECO:0000313|EMBL:AJY40610.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. 2002721687.;"
PLM3_60_coex_sep16_scaffold_1738_3
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

2525..3928
DNA (1404bp) protein (468aa)
Hydroxymethylpyrimidine transporter CytX Tax=uncultured prokaryote RepID=H5SLW1_9ZZZZ
hydroxymethylpyrimidine transporter CytX
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_60_coex_sep16_scaffold_1738_4
unknown

Not on your lists

4311..4487
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1738_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4487..5053
DNA (567bp) protein (189aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRU3_ACIC1
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK52153.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_1738_6
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5050..6030
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Eimeria brunetti RepID=U6LL98_9EIME
Uncharacterized protein {ECO:0000313|EMBL:EWM18906.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
PLM3_60_coex_sep16_scaffold_1738_7
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

6178..6414
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B0D9_HERA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX05248.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_60_coex_sep16_scaffold_1738_8
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6792..7253
DNA (462bp) protein (154aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026260F5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ24853.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM3_60_coex_sep16_scaffold_1738_9
unknown

Not on your lists

7437..7565
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1738_10
unknown

Not on your lists

comp(7704..7841)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1738_11
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7838..8671)
DNA (834bp) protein (278aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036660BB
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AGL20822.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM3_60_coex_sep16_scaffold_1738_12
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8719..10680)
DNA (1962bp) protein (654aa)
Glucanase {ECO:0000256|RuleBase:RU361186}; EC=3.2.1.- {ECO:0000256|RuleBase:RU361186};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036660BB
putative glycosyl hydrolase
PLM3_60_coex_sep16_scaffold_1738_13
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10956..11507
DNA (552bp) protein (184aa)
RNA polymerase sigma24 factor Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00037B154E
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KFF98721.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
sigma factor
PLM3_60_coex_sep16_scaffold_1738_14
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11529..12407
DNA (879bp) protein (293aa)
Putative integral membrane protein Tax=Streptomyces scabies (strain 87.22) RepID=C9YXC8_STRSW
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:CBG67908.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
Displaying 14 items

View Taxonomy