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PLM3_60_coex_sep16_scaffold_1800

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1800_1
unknown

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comp(1..123)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1800_2
unknown

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comp(390..839)
DNA (450bp) protein (150aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1800_3
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(862..1632)
DNA (771bp) protein (257aa)
Pterin-4-alpha-carbinolamine dehydratase {ECO:0000313|EMBL:EAQ00063.1}; EC=4.2.1.96 {ECO:0000313|EMBL:EAQ00063.1};; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
Pterin-4-alpha-carbinolamine dehydratase Tax=Janibacter sp. HTCC2649 RepID=A3TGV3_9MICO
pterin-4-alpha-carbinolamine dehydratase
PLM3_60_coex_sep16_scaffold_1800_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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1854..4838
DNA (2985bp) protein (995aa)
Transcriptional regulator, LuxR family bin=GWC2_Chloroflexi_73_18 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
LuxR family transcriptional regulator
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_1800_5
unknown

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comp(5062..5412)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1800_6
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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5576..5932
DNA (357bp) protein (119aa)
Transposase Tax=Nitrolancetus hollandicus Lb RepID=I4EMW3_9CHLR
Transposase {ECO:0000313|EMBL:CCF86026.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1800_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

6013..6399
DNA (387bp) protein (129aa)
Transposase Tax=Nitrolancetus hollandicus Lb RepID=I4EMW2_9CHLR
transposase
Transposase {ECO:0000313|EMBL:CCF86025.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
PLM3_60_coex_sep16_scaffold_1800_8
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6409..7206)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea RepID=A4FAD2_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAM01007.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM3_60_coex_sep16_scaffold_1800_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(7555..8526)
DNA (972bp) protein (324aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00035DD276
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB77495.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_1800_10
unknown

Not on your lists

comp(8523..8876)
DNA (354bp) protein (118aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036D1900
PLM3_60_coex_sep16_scaffold_1800_11
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(8885..9391)
DNA (507bp) protein (169aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00038230F6
Cupin domain
Cupin domain {ECO:0000313|EMBL:AHY47147.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_60_coex_sep16_scaffold_1800_12
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9505..10668
DNA (1164bp) protein (388aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036B7A94
LuxR family transcriptional regulator
Possible transcriptional regulator, LuxR family protein {ECO:0000313|EMBL:ABG94580.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
PLM3_60_coex_sep16_scaffold_1800_13
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10934..11713)
DNA (780bp) protein (260aa)
Transcriptional regulator, GntR family Tax=Frankia sp. (strain EuI1c) RepID=E3IX27_FRASU
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADP83799.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_1800_trna_1
unknown

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comp(11931..12022)
DNA (92bp)
transferRNA Leu
PLM3_60_coex_sep16_scaffold_1800_14
unknown

Not on your lists

comp(12066..12176)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 15 items

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