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PLM3_60_coex_sep16_scaffold_1823

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1823_1
unknown

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comp(1..81)
DNA (81bp) protein (27aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1823_2
unknown

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comp(161..310)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1823_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(342..653)
DNA (312bp) protein (104aa)
id=3864198 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_1823_4
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(631..1572)
DNA (942bp) protein (314aa)
malate dehydrogenase Tax=Frankia sp. BMG5.12 RepID=UPI00037B1917
malate dehydrogenase
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_60_coex_sep16_scaffold_1823_5
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(1572..2660)
DNA (1089bp) protein (363aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.41)
Isocitrate dehydrogenase (NADP) {ECO:0000313|EMBL:CCW34096.1}; EC=1.1.1.41 {ECO:0000313|EMBL:CCW34096.1};; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Isocitrate dehydrogenase (NADP) Tax=Chthonomonas calidirosea T49 RepID=S0ESB2_9BACT
PLM3_60_coex_sep16_scaffold_1823_6
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2777..3898
DNA (1122bp) protein (374aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3X6_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
PLM3_60_coex_sep16_scaffold_1823_7

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4049..5998
DNA (1950bp) protein (650aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00035F2065
Elongation factor Tu GTP binding domain protein {ECO:0000313|EMBL:AIA10470.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tetM; tetracycline resistance protein
PLM3_60_coex_sep16_scaffold_1823_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(6014..6907)
DNA (894bp) protein (298aa)
Methylenetetrahydrofolate reductase Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3P9_THEGP
methylenetetrahydrofolate reductase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1823_9
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(6904..7767)
DNA (864bp) protein (288aa)
folD; bifunctional methylenetetrahydrofolate dehydrogenase (NADP)/methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD Tax=Modestobacter marinus (strain BC501) RepID=I4F3J5_MODMB
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
PLM3_60_coex_sep16_scaffold_1823_10
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7826..8371
DNA (546bp) protein (182aa)
Putative G/U mismatch-specific DNA glycosylase Tax=Streptomyces sp. Tu6071 RepID=F3ZC38_9ACTO
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ62566.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
Uracil-DNA glycosylase superfamily
PLM3_60_coex_sep16_scaffold_1823_11
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8586..10178)
DNA (1593bp) protein (531aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2M7_CELFA
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
PLM3_60_coex_sep16_scaffold_1823_12
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10175..10858)
DNA (684bp) protein (228aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
Phosphoribosylglycinamide formyltransferase Tax=Isoptericola variabilis (strain 225) RepID=F6FWX8_ISOV2
PLM3_60_coex_sep16_scaffold_1823_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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11026..11430
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VXL8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ41718.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_60_coex_sep16_scaffold_1823_14
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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11473..11967
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CN85_SYNLT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3_60_coex_sep16_scaffold_1823_15
unknown

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11988..12092
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 15 items

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