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PLM3_60_coex_sep16_scaffold_1831

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1831_1
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..104)
DNA (102bp) protein (34aa)
Uncharacterized protein Tax=Streptomyces bottropensis ATCC 25435 RepID=M3F5V8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK37509.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative flavin reductase
PLM3_60_coex_sep16_scaffold_1831_2
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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152..643
DNA (492bp) protein (164aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000378894C
Predicted protein {ECO:0000313|EMBL:EFL05940.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
MarR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_1831_3

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738..1223
DNA (486bp) protein (162aa)
hypothetical protein Tax=actinobacterium SCGC AAA015-D07 RepID=UPI00002A72A0
Marine sediment metagenome DNA, contig: S01H1_S21964 {ECO:0000313|EMBL:GAG18329.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_60_coex_sep16_scaffold_1831_4
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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1333..3537
DNA (2205bp) protein (735aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4EWH3_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH87736.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3_60_coex_sep16_scaffold_1831_5
unknown

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comp(3574..4686)
DNA (1113bp) protein (371aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1831_6
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4864..6003)
DNA (1140bp) protein (380aa)
hypothetical protein Tax=Streptomyces sp. FxanaC1 RepID=UPI00035E503E
WD-40 repeat protein {ECO:0000313|EMBL:CDR05509.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1831_7
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6190..6393
DNA (204bp) protein (68aa)
cold-shock protein Tax=Orenia marismortui RepID=UPI0003779658
cold-shock protein
Cold-shock protein {ECO:0000313|EMBL:AJY73386.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
PLM3_60_coex_sep16_scaffold_1831_8
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6486..6821
DNA (336bp) protein (112aa)
hypothetical protein Tax=Streptomyces sp. CNT302 RepID=UPI00038041E0
anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM3_60_coex_sep16_scaffold_1831_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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7037..8491
DNA (1455bp) protein (485aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000382E747
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_60_coex_sep16_scaffold_1831_10
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8488..8880
DNA (393bp) protein (131aa)
LuxR family transcriptional regulator Tax=Streptomyces sp. R1-NS-10 RepID=UPI00036D87DF
Uncharacterized protein {ECO:0000313|EMBL:KIH77776.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
two component LuxR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_1831_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8990..11179)
DNA (2190bp) protein (730aa)
Putative diguanylate cyclase/phosphodiesterase with PAS sensor Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W724_9ACTO
putative diguanylate cyclase/phosphodiesterase with PAS sensor
Putative diguanylate cyclase/phosphodiesterase with PAS sensor {ECO:0000313|EMBL:AGZ44998.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_60_coex_sep16_scaffold_1831_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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11256..12053
DNA (798bp) protein (266aa)
Ornithine decarboxylase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W781_9ACTO
ornithine decarboxylase
Ornithine decarboxylase {ECO:0000313|EMBL:AGZ44999.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Displaying 12 items

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