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PLM3_60_coex_sep16_scaffold_1890

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1890_1
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..559
DNA (558bp) protein (186aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXZ5_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:KIC44231.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1890_2
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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564..6227
DNA (5664bp) protein (1888aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXZ6_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ91499.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3_60_coex_sep16_scaffold_1890_3
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6224..8083
DNA (1860bp) protein (620aa)
Uncharacterized protein Tax=Leptolyngbya sp. PCC 7375 RepID=K9F0E3_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIC44233.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1890_4
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8275..9066)
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JL09_STRRC
Uncharacterized protein {ECO:0000313|EMBL:CEL16476.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
PLM3_60_coex_sep16_scaffold_1890_5
unknown

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9239..9619
DNA (381bp) protein (127aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1890_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10339..10677
DNA (339bp) protein (113aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFV9_NITGG
pterin-4-alpha-carbinolamine dehydratase
PLM3_60_coex_sep16_scaffold_1890_7
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11034..11597)
DNA (564bp) protein (188aa)
hypothetical protein Tax=Nocardiopsis chromatogenes RepID=UPI00034AB79E
UspA domain protein {ECO:0000313|EMBL:EFC86102.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
UspA domain-containing protein
PLM3_60_coex_sep16_scaffold_1890_8
unknown

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11617..12864
DNA (1248bp) protein (416aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1890_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(12732..14051)
DNA (1320bp) protein (440aa)
Transposase IS4 family protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X687_NAKMY
transposase IS4 family protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_1890_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(14358..15755)
DNA (1398bp) protein (466aa)
FAD linked oxidase domain protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCF6_NOCSJ
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABL79491.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_60_coex_sep16_scaffold_1890_11
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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15881..16573
DNA (693bp) protein (231aa)
Helix-turn-helix, HxlR type Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCF7_NOCSJ
helix-turn-helix, HxlR type
Helix-turn-helix, HxlR type {ECO:0000313|EMBL:ABL79492.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Displaying 11 items

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