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PLM3_60_coex_sep16_scaffold_195

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_195_1
unknown

Not on your lists

2..67
DNA (66bp) protein (22aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_195_2
unknown

Not on your lists

comp(419..589)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_195_3
unknown

Not on your lists

comp(694..1056)
DNA (363bp) protein (121aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_195_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1237..1608
DNA (372bp) protein (124aa)
Transposase, IS116/IS110/IS902 (Fragment) Tax=mine drainage metagenome RepID=T0ZE89_9ZZZZ
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_195_5
unknown

Not on your lists

1681..1866
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_195_6
unknown

Not on your lists

2613..3023
DNA (411bp) protein (137aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_195_7
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3260..4759)
DNA (1500bp) protein (500aa)
Sodium/hydrogen exchanger Tax=Amycolatopsis mediterranei RepID=D8I7P6_AMYMU
Sodium:proton exchanger {ECO:0000313|EMBL:KHL05115.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
cvrA; sodium/hydrogen exchanger
PLM3_60_coex_sep16_scaffold_195_8
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4937..6295)
DNA (1359bp) protein (453aa)
Putative membrane protein Tax=Mycobacterium liflandii (strain 128FXT) RepID=L7V7R2_MYCL1
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:ACC42529.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
PLM3_60_coex_sep16_scaffold_195_9
unknown

Not on your lists

6906..7655
DNA (750bp) protein (250aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_195_10
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8209..9816)
DNA (1608bp) protein (536aa)
Putative hydrolase Tax=Streptomyces davawensis JCM 4913 RepID=K4QX69_9ACTO
Hydrolase {ECO:0000313|EMBL:AKE89320.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
putative hydrolase
PLM3_60_coex_sep16_scaffold_195_11
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9907..11460)
DNA (1554bp) protein (518aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026255BF
Uncharacterized protein {ECO:0000313|EMBL:AKE92448.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
LuxR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_195_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11925..12134)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW96375.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_60_coex_sep16_scaffold_195_13
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12483..13127
DNA (645bp) protein (215aa)
Putative transposase Tax=Frankia sp. (strain CcI3) RepID=Q2J5C7_FRASC
transposase
Putative transposase {ECO:0000313|EMBL:ABD13515.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM3_60_coex_sep16_scaffold_195_14
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13530..14264)
DNA (735bp) protein (245aa)
flavodoxin Tax=Streptomyces sp. CNT302 RepID=UPI000365DF5F
BRAMP containing protein {ECO:0000313|EMBL:EMD22696.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
divalent cation-transport integral membrane protein mntH
PLM3_60_coex_sep16_scaffold_195_15
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14532..14924)
DNA (393bp) protein (131aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RKG2_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP70780.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_195_16
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15017..15373)
DNA (357bp) protein (119aa)
seg 2..11 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_195_17
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(15408..15770)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EDF2_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_60_coex_sep16_scaffold_195_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16155..16457
DNA (303bp) protein (101aa)
Antibiotic biosynthesis monooxygenase Tax=Pseudomonas putida SJ3 RepID=U7RI21_PSEPU
hypothetical protein
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KJZ52956.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
PLM3_60_coex_sep16_scaffold_195_19
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

16678..17037
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MXG0_9ACTO
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_195_20
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

17042..18286
DNA (1245bp) protein (415aa)
hypothetical protein Tax=Streptomyces sp. CNS615 RepID=UPI00035C6A43
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_60_coex_sep16_scaffold_195_21
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18478..18657)
DNA (180bp) protein (60aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:ABC81924.1}; EC=3.2.2.20 {ECO:0000313|EMBL:ABC81924.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
DNA-3-methyladenine glycosylase I Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJU2_ANADE
PLM3_60_coex_sep16_scaffold_195_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18654..19574)
DNA (921bp) protein (307aa)
hypothetical protein Tax=Kaistia granuli RepID=UPI0003686DA6
DNA-3-methyladenine glycosylase 1
DNA-3-methyladenine glycosylase 1 {ECO:0000313|EMBL:AGB70189.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
PLM3_60_coex_sep16_scaffold_195_23
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19571..19876)
DNA (306bp) protein (102aa)
hypothetical protein Tax=Cellulomonas sp. JC225 RepID=UPI0002EADF5A
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ADP78945.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_195_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19987..20442
DNA (456bp) protein (152aa)
Putative polyketide cyclase/dehydrase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHR1_NITGG
polyketide cyclase/dehydrase
Putative polyketide cyclase/dehydrase {ECO:0000313|EMBL:AFU59475.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_60_coex_sep16_scaffold_195_25
RLO_PLX_64_10, Bacteria

Not on your lists

comp(20378..21448)
DNA (1071bp) protein (357aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PVT0_9ACTO
RNA polymerase factor sigma-70
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_coex_sep16_scaffold_195_26
R_Gammaproteobacteria_45_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21470..21835
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PND8_9ACTO
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_45_9_curated
PLM3_60_coex_sep16_scaffold_195_27
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21976..22329
DNA (354bp) protein (118aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJZ3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY75175.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
PLM3_60_coex_sep16_scaffold_195_28
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22569..23279)
DNA (711bp) protein (237aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000361C051
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60761.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_195_29
unknown

Not on your lists

comp(23408..23608)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_195_30
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23711..23890)
DNA (180bp) protein (60aa)
Uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9F6_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE04683.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Displaying items 1-30 of 45 in total

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