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PLM3_60_coex_sep16_scaffold_273

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_273_1
Thermobaculum terrenum, Thermobaculum, Bacteria

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1..1503
DNA (1503bp) protein (501aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Leucine--tRNA ligase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG69_THET1
leucyl-tRNA synthetase
PLM3_60_coex_sep16_scaffold_273_2
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1467..2480)
DNA (1014bp) protein (338aa)
hypothetical protein Tax=Streptomyces sp. CcalMP-8W RepID=UPI000361426A
Uncharacterized protein {ECO:0000313|EMBL:EWC60229.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Hypothetical protein
PLM3_60_coex_sep16_scaffold_273_3
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2480..3469)
DNA (990bp) protein (330aa)
hypothetical protein Tax=Streptomyces sp. Wigar10 RepID=UPI000315A702
Uncharacterized protein {ECO:0000313|EMBL:KES03174.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_273_4
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3544..4962
DNA (1419bp) protein (473aa)
hypothetical protein Tax=Streptomyces viridosporus RepID=UPI0002DDC6D9
Translation initiation factor IF-2 {ECO:0000313|EMBL:KES03167.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
AMP-dependent synthetase and ligase
PLM3_60_coex_sep16_scaffold_273_5
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4972..6051)
DNA (1080bp) protein (360aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037ABC41
PLM3_60_coex_sep16_scaffold_273_6
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6048..8060)
DNA (2013bp) protein (671aa)
bga2; beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084, ECO:0000313|EMBL:CAM04398.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00036DCF83
PLM3_60_coex_sep16_scaffold_273_7
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8066..8893)
DNA (828bp) protein (276aa)
Transcriptional regulator, DeoR family Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJE9_ACTMD
DeoR-family transcriptional regulator, glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:EWM14183.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
DeoR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_273_8
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9044..10351
DNA (1308bp) protein (436aa)
Solute-binding transporter Tax=Streptomyces bottropensis RepID=M3D2X1_9ACTO
Solute-binding transporter {ECO:0000313|EMBL:EMF50457.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 25435.;"
solute-binding transporter
PLM3_60_coex_sep16_scaffold_273_9
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10354..11286
DNA (933bp) protein (311aa)
ABC transporter permease Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI000380E5A2
ABC transporter permease {ECO:0000313|EMBL:KIE37820.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
ABC transporter permease
PLM3_60_coex_sep16_scaffold_273_10
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11287..12216
DNA (930bp) protein (310aa)
ABC transporter permease Tax=Streptomyces prunicolor RepID=UPI000366886D
ABC transporter inner membrane protein
ABC transporter inner membrane protein {ECO:0000313|EMBL:AHH94099.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM3_60_coex_sep16_scaffold_273_11
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12221..14359
DNA (2139bp) protein (713aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase Tax=Micromonospora sp. (strain L5) RepID=E8SD07_MICSL
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65797.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
PLM3_60_coex_sep16_scaffold_273_12
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14369..15667
DNA (1299bp) protein (433aa)
Aminotransferase class V Tax=Micromonospora sp. (strain L5) RepID=E8S169_MICSL
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ADL47159.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM3_60_coex_sep16_scaffold_273_13
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15679..16566)
DNA (888bp) protein (296aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6HIV8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFC83535.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
PLM3_60_coex_sep16_scaffold_273_14
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16717..18153)
DNA (1437bp) protein (479aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
6-phosphogluconate dehydrogenase, decarboxylating Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2G5_THEBD
6-phosphogluconate dehydrogenase
PLM3_60_coex_sep16_scaffold_273_15
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18290..19342
DNA (1053bp) protein (351aa)
Zn-dependent hydrolase including glyoxylase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYY9_STRRD
Zn-dependent hydrolase
Zn-dependent hydrolase including glyoxylase-like protein {ECO:0000313|EMBL:ACZ90926.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_273_16
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19303..19629)
DNA (327bp) protein (109aa)
cytochrome C biogenesis protein CcdA Tax=Streptomyces somaliensis RepID=UPI00029A6D8E
CutA1 divalent ion tolerance protein
CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:ACY98677.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_60_coex_sep16_scaffold_273_17
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19685..21100)
DNA (1416bp) protein (472aa)
Major facilitator superfamily MFS_1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L6I8_FRASN
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABW10670.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_273_18
unknown

Not on your lists

21276..21653
DNA (378bp) protein (126aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_273_19
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21800..22630
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUX1_BLASD
Serine protease {ECO:0000313|EMBL:KGH46197.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_273_20
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22765..23016
DNA (252bp) protein (84aa)
AsnC family transcriptional regulator Tax=Actinomadura madurae LIID-AJ290 RepID=U2MQC0_9ACTO
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADB33844.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_60_coex_sep16_scaffold_273_21
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23026..23508
DNA (483bp) protein (161aa)
hypothetical protein Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00037711E4
hypothetical protein
UPF0678 fatty acid-binding protein-like protein Mvan_0449 {ECO:0000255|HAMAP-Rule:MF_01297}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1).;"
PLM3_60_coex_sep16_scaffold_273_22
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23600..23995
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BDR7_STRRD
Glyoxalase {ECO:0000313|EMBL:ETK37845.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_273_23
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23998..24468)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Methylobacterium sp. (strain 4-46) RepID=B0UAH7_METS4
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
PLM3_60_coex_sep16_scaffold_273_24
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

24757..25128
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGK6_THET1
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_60_coex_sep16_scaffold_273_25
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

25121..25501
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EKQ4_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_273_26
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25508..25972)
DNA (465bp) protein (155aa)
Redoxin domain-containing protein Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V5B9_MYCVA
Redoxin domain-containing protein {ECO:0000313|EMBL:EJZ12760.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
putative peroxiredoxin
PLM3_60_coex_sep16_scaffold_273_27
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26057..26392
DNA (336bp) protein (112aa)
hypothetical protein Tax=Massilia niastensis RepID=UPI00035F2C24
Glyoxalase {ECO:0000313|EMBL:KFI09000.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM3_60_coex_sep16_scaffold_273_28
unknown

Not on your lists

comp(26471..27148)
DNA (678bp) protein (226aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_273_29
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27219..28079)
DNA (861bp) protein (287aa)
Putative peptidoglycan binding protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GX94_ACTM4
putative peptidoglycan binding protein
Putative peptidoglycan binding protein {ECO:0000313|EMBL:BAL85381.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_60_coex_sep16_scaffold_273_30
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

28193..28573
DNA (381bp) protein (127aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003764A75
hypothetical protein
Tax=GWD1_Spirochaetes_27_9_curated
Displaying items 1-30 of 33 in total

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