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PLM3_60_coex_sep16_scaffold_308

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_308_1
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(524..1900)
DNA (1377bp) protein (459aa)
WD40 domain protein beta Propeller Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPA0_ROSS1
WD40 domain protein beta Propeller {ECO:0000313|EMBL:ABQ88453.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
WD40 domain-containing protein
PLM3_60_coex_sep16_scaffold_308_2
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2306..3520)
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Gloeobacter kilaueensis JS1 RepID=U5QHC1_9CYAN
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
PLM3_60_coex_sep16_scaffold_308_3
Corynebacterium glutamicum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4784..8575
DNA (3792bp) protein (1264aa)
Transfer protein homolog TraA Tax=Corynebacterium glutamicum RepID=Q9EUN8_CORGT
Transfer protein homolog TraA {ECO:0000313|EMBL:AAG00272.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glutamicum (Brevibacterium saccharolyticum).;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_308_4
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8599..9669
DNA (1071bp) protein (357aa)
Uncharacterized protein Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2KAL7_STRHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY94360.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM3_60_coex_sep16_scaffold_308_5
unknown

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9750..10265
DNA (516bp) protein (172aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_308_6
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10838..11860)
DNA (1023bp) protein (341aa)
Transposase IS116/IS110/IS902 family protein Tax=Frankia sp. (strain EAN1pec) RepID=A8LD19_FRASN
Transposase {ECO:0000313|EMBL:EWM10553.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
transposase IS116/IS110/IS902 family protein
PLM3_60_coex_sep16_scaffold_308_7
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12683..13501
DNA (819bp) protein (273aa)
Shikimate dehydrogenase substrate binding domain protein Tax=Thiorhodococcus drewsii AZ1 RepID=G2DYS8_9GAMM
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:EGV32705.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
shikimate dehydrogenase
PLM3_60_coex_sep16_scaffold_308_8
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(13808..15316)
DNA (1509bp) protein (503aa)
hypothetical protein Tax=actinobacterium SCGC AAA278-I18 RepID=UPI00036F0FA9
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAM00235.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_60_coex_sep16_scaffold_308_9
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15677..16534)
DNA (858bp) protein (286aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Shikimate dehydrogenase Tax=Frankia sp. (strain EAN1pec) RepID=A8L4U7_FRASN
shikimate dehydrogenase
PLM3_60_coex_sep16_scaffold_308_10
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(16824..17639)
DNA (816bp) protein (272aa)
sugar ABC transporter ATP-binding protein Tax=Meiothermus timidus RepID=UPI000369B8CD
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADH62128.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
PLM3_60_coex_sep16_scaffold_308_11
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17636..18649)
DNA (1014bp) protein (338aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Inner-membrane translocator Tax=Frankia sp. EUN1f RepID=D3D4F5_9ACTO
Inner-membrane translocator {ECO:0000313|EMBL:EFC82220.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
PLM3_60_coex_sep16_scaffold_308_12
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18758..19807)
DNA (1050bp) protein (350aa)
Periplasmic binding protein/LacI transcriptional regulator Tax=Frankia sp. EUN1f RepID=D3D4F4_9ACTO
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EFC82219.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
substrate-binding component of ABC transporter
PLM3_60_coex_sep16_scaffold_308_13
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19927..20988
DNA (1062bp) protein (354aa)
hypothetical protein Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI0003756EFE
LacI-family transcriptional regulator {ECO:0000313|EMBL:EEP74713.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
LacI family transcriptional regulator
PLM3_60_coex_sep16_scaffold_308_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21960..22658)
DNA (699bp) protein (233aa)
Transposase IS4 family protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X687_NAKMY
transposase IS4 family protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_308_15
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(22648..23058)
DNA (411bp) protein (137aa)
Transposase IS4 family protein Tax=mine drainage metagenome RepID=T1AV44_9ZZZZ
transposase IS4 family protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_308_16
unknown

Not on your lists

comp(23384..24163)
DNA (780bp) protein (260aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_308_17
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24153..25967)
DNA (1815bp) protein (605aa)
transcriptional regulator Tax=Nonomuraea coxensis RepID=UPI00037FC81F
hypothetical protein
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_308_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25964..27814)
DNA (1851bp) protein (617aa)
TRAG protein Tax=Patulibacter medicamentivorans RepID=H0E9C3_9ACTN
TRAG protein {ECO:0000313|EMBL:EHN09733.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
TraG/TraD family protein
Displaying 18 items

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