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PLM3_60_coex_sep16_scaffold_360

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_360_1
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..725)
DNA (723bp) protein (241aa)
Methyltransferase type 11 Tax=Frankia sp. EUN1f RepID=D3D638_9ACTO
Methyltransferase type 11 {ECO:0000313|EMBL:EFC81604.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
type 11 methyltransferase
PLM3_60_coex_sep16_scaffold_360_2
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

833..1249
DNA (417bp) protein (139aa)
Putative membrane protein Tax=Streptomyces sp. Tu6071 RepID=F3ZAA7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJY34189.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_360_3
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(1304..1774)
DNA (471bp) protein (157aa)
CBS domain containing protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW6_THET1
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:ACZ42987.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3_60_coex_sep16_scaffold_360_4

Not on your lists

comp(1811..2014)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW5_THET1
Uncharacterized protein {ECO:0000313|EMBL:KKN10446.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_360_5
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2092..2625)
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Bacillus cereus RepID=J8S4I9_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJS69713.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2X1-2.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_360_6
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2646..3326)
DNA (681bp) protein (227aa)
Uncharacterized protein (Fragment) Tax=Bacillus cereus VD140 RepID=R8SP40_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOP96478.1}; Flags: Fragment;; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD140.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_360_7
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3637..5550
DNA (1914bp) protein (638aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI0003615C43
Uncharacterized protein {ECO:0000313|EMBL:KDN19893.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
PLM3_60_coex_sep16_scaffold_360_8
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5543..8500
DNA (2958bp) protein (986aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI000364ADB2
Uncharacterized protein {ECO:0000313|EMBL:KDN19892.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
PLM3_60_coex_sep16_scaffold_360_9
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8504..10018
DNA (1515bp) protein (505aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI0003634695
Uncharacterized protein {ECO:0000313|EMBL:KDN19891.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
radical SAM domain-containing protein
PLM3_60_coex_sep16_scaffold_360_10
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10009..10698)
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea RepID=A4F9U4_SACEN
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KKD05128.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
PLM3_60_coex_sep16_scaffold_360_11
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10695..11699)
DNA (1005bp) protein (335aa)
Integral membrane protein Tax=Streptomyces davawensis JCM 4913 RepID=K4QUH8_9ACTO
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:CCK24517.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM3_60_coex_sep16_scaffold_360_12
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

11788..13671
DNA (1884bp) protein (628aa)
5'-nucleotidase; K01081 5'-nucleotidase [EC:3.1.3.5] bin=bin8_Chloro species=Methylosarcina fibrata genus=Methylosarcina taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
5'-nucleotidase domain-containing protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_360_13
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13709..14476
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3J595_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP80693.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_360_14
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14532..15224
DNA (693bp) protein (231aa)
GntR family transcriptional regulator Tax=Streptomyces rapamycinicus RepID=UPI000382FE8C
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EXU67655.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
PLM3_60_coex_sep16_scaffold_360_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15221..16525)
DNA (1305bp) protein (435aa)
fuconate dehydratase Tax=Saccharopolyspora spinosa RepID=UPI0002379630
Mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:AHG93141.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_60_coex_sep16_scaffold_360_16
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(16522..17547)
DNA (1026bp) protein (342aa)
ABC transporter permease; K02026 multiple sugar transport system permease protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC transporter permease
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM3_60_coex_sep16_scaffold_360_17
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(17552..18706)
DNA (1155bp) protein (385aa)
Putative ABC transporter permease protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I885_CALAS
ABC transporter permease
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_60_coex_sep16_scaffold_360_18

Not on your lists

comp(18711..20222)
DNA (1512bp) protein (504aa)
ABC transporter system substrate-binding protein Tax=uncultured prokaryote RepID=H5SGC3_9ZZZZ
ABC transporter system substrate-binding protein {ECO:0000313|EMBL:BAL55209.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
putative ABC transporter solute-binding protein
PLM3_60_coex_sep16_scaffold_360_19
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(20288..20710)
DNA (423bp) protein (141aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003677E0F
transport protein RbsD/FucU
RbsD or FucU transport {ECO:0000313|EMBL:ABU58905.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3_60_coex_sep16_scaffold_360_20
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20735..21583)
DNA (849bp) protein (283aa)
amidohydrolase Tax=Streptomyces rapamycinicus RepID=UPI000382F9C0
Amidohydrolase {ECO:0000313|EMBL:KKA36611.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
amidohydrolase
PLM3_60_coex_sep16_scaffold_360_21
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21570..22577)
DNA (1008bp) protein (336aa)
Aldo/keto reductase Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P6A3_STRVO
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:KKA36619.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
PLM3_60_coex_sep16_scaffold_360_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22577..23362)
DNA (786bp) protein (262aa)
Short chain dehydrogenase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYS7_STRRD
short chain dehydrogenase
Short chain dehydrogenase {ECO:0000313|EMBL:ACZ90864.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_360_23
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23372..24223)
DNA (852bp) protein (284aa)
5-carboxymethyl-2-hydroxymuconatedelta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconateDelta-isomerase {ECO:0000313|EMBL:ACU73779.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ACU73779.1};; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00037A19A2
PLM3_60_coex_sep16_scaffold_360_24
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24324..24821
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H5R2_ACTM4
Cupin {ECO:0000313|EMBL:KIF79569.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_360_25
unknown

Not on your lists

comp(25019..25786)
DNA (768bp) protein (256aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_360_26
unknown

Not on your lists

comp(25949..26320)
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_360_27
RLO_PLX_64_10, Bacteria

Not on your lists

comp(26493..28607)
DNA (2115bp) protein (705aa)
Adenylate/guanylate cyclase bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_coex_sep16_scaffold_360_28
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28664..29158)
DNA (495bp) protein (165aa)
Tetratricopeptide repeat protein Tax=Streptomyces ipomoeae 91-03 RepID=L1L555_9ACTO
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKX67924.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_360_29
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

29322..29723
DNA (402bp) protein (134aa)
Multi-sensor hybrid histidine kinase Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0I0_ROSS1
multi-sensor hybrid histidine kinase
Tax=RBG_16_Chloroflexi_57_9_curated
Displaying 29 items

View Taxonomy