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PLM3_60_coex_sep16_scaffold_478

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_478_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2..520)
DNA (519bp) protein (173aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037225A9
alpha/beta hydrolase fold protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_478_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(579..1094)
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Frankia sp. QA3 RepID=I9KE97_9ACTO
Activator of Hsp90 ATPase 1 family protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_478_3
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1091..1426)
DNA (336bp) protein (112aa)
Transcriptional regulator Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X1H0_STRVR
ArsR family transcriptional regulator
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_478_4
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1821..4043)
DNA (2223bp) protein (741aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4EWH3_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH87736.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3_60_coex_sep16_scaffold_478_5
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4326..5540
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GY65_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL85702.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_60_coex_sep16_scaffold_478_6
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6000..6347
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4EUX1_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH87184.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3_60_coex_sep16_scaffold_478_7
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6578..7363)
DNA (786bp) protein (262aa)
hypothetical protein Tax=Streptomyces purpureus RepID=UPI00035D1F9B
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AFU01431.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
PLM3_60_coex_sep16_scaffold_478_8
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7756..8628)
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HT04_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL42801.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
PLM3_60_coex_sep16_scaffold_478_9
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8637..9260)
DNA (624bp) protein (208aa)
Uncharacterized protein Tax=Thioflavicoccus mobilis 8321 RepID=L0GVW9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA89454.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
PLM3_60_coex_sep16_scaffold_478_10
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9443..10759
DNA (1317bp) protein (439aa)
Serine/threonine protein kinase Tax=Microcystis aeruginosa RepID=I4I3E4_MICAE
Serine/threonine protein kinase {ECO:0000313|EMBL:CCI28818.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9809.;"
Serine/threonine-protein kinase-like domain-containing protein
PLM3_60_coex_sep16_scaffold_478_11
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10746..11549)
DNA (804bp) protein (268aa)
PASTA-related domain protein Tax=Geobacter metallireducens RepID=Q39WE1_GEOMG
PASTA-related domain-containing protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
PLM3_60_coex_sep16_scaffold_478_12
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11675..12880
DNA (1206bp) protein (402aa)
Uncharacterized protein Tax=Microcystis aeruginosa PCC 9808 RepID=I4HL99_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI22823.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9808.;"
HEAT-like repeat protein
PLM3_60_coex_sep16_scaffold_478_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12873..13208)
DNA (336bp) protein (112aa)
single-stranded DNA-binding protein Tax=Salinispora pacifica RepID=UPI000376B00B
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM3_60_coex_sep16_scaffold_478_14
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(13519..14310)
DNA (792bp) protein (264aa)
Methyltransferase type 11 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVH2_PARL1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_60_coex_sep16_scaffold_478_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

15008..15391
DNA (384bp) protein (128aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_478_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

15411..17120
DNA (1710bp) protein (570aa)
Transmembrane efflux protein bin=GWC2_Chloroflexi_73_18 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
EmrB/QacA subfamily drug resistance transporter
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_478_17

Not on your lists

17882..18313
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZS4_METPS
Uncharacterized protein {ECO:0000313|EMBL:CEG14057.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_478_18
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18553..19758
DNA (1206bp) protein (402aa)
hypothetical protein Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035C15D7
Family 3 adenylate cyclase {ECO:0000313|EMBL:EJL48578.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
adenylate/guanylate cyclase
PLM3_60_coex_sep16_scaffold_478_19
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(20087..20362)
DNA (276bp) protein (92aa)
integrase Tax=Frankia sp. Iso899 RepID=UPI0003B6ED29
Integrase family protein {ECO:0000313|EMBL:CCF85057.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
integrase family protein
PLM3_60_coex_sep16_scaffold_478_20
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(20519..21034)
DNA (516bp) protein (172aa)
Tyrosine recombinase xerC Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQZ9_BLASD
xerC2; tyrosine recombinase XerC
Tax=BJP_IG2069_Chloroflexi_70_12
PLM3_60_coex_sep16_scaffold_478_21
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21117..22352)
DNA (1236bp) protein (412aa)
Transposase IS116/IS110/IS902 family protein Tax=Mycobacterium canettii RepID=G0TNW5_MYCCP
Transposase
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:CCC42720.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
Displaying 21 items

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