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PLM3_60_coex_sep16_scaffold_526

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_526_1
unknown

Not on your lists

comp(98..364)
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_526_2
unknown

Not on your lists

comp(383..694)
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_526_3
unknown

Not on your lists

comp(1292..1531)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_526_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

1715..4273
DNA (2559bp) protein (853aa)
LuxR family transcriptional regulator bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
ATPase-like protein
Tax=CSP1_3_Armatimonadetes
PLM3_60_coex_sep16_scaffold_526_5
unknown

Not on your lists

comp(4306..4482)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_526_6
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4570..5436)
DNA (867bp) protein (289aa)
Alpha/beta hydrolase fold protein Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0E9_HALTV
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB62846.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 /; VKM B-1734) (Halococcus turkmenicus).;"
PLM3_60_coex_sep16_scaffold_526_7
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5495..5896)
DNA (402bp) protein (134aa)
hypothetical protein Tax=Marinobacterium rhizophilum RepID=UPI0003612E73
Cupin 2 barrel domain-containing protein {ECO:0000313|EMBL:EON91756.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipolyticus SM19.;"
putative cupin
PLM3_60_coex_sep16_scaffold_526_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6080..8209
DNA (2130bp) protein (710aa)
hypothetical protein Tax=Streptomyces sp. CNT302 RepID=UPI00036BBD87
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABL79491.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_60_coex_sep16_scaffold_526_9
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8288..8494
DNA (207bp) protein (69aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI00034AF196
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCG04411.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_60_coex_sep16_scaffold_526_10
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(8484..9722)
DNA (1239bp) protein (413aa)
phosphoribosylglycinamide synthetase bin=bin8_Chloro species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_526_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9728..10252)
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX07414.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM3_60_coex_sep16_scaffold_526_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10268..11464)
DNA (1197bp) protein (399aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WQM2_RHOS5
Uncharacterized protein {ECO:0000313|EMBL:ETW99780.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_60_coex_sep16_scaffold_526_13
unknown

Not on your lists

comp(11497..11745)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_526_14
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(11893..12309)
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MSQ3_9ACTO
ubiquinone/menaquinone biosynthesis methylase
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AEP13625.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM3_60_coex_sep16_scaffold_526_15
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12475..13743)
DNA (1269bp) protein (423aa)
MFS transporter Tax=Rhodococcus ruber RepID=UPI000347B7AB
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDZ87296.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
major facilitator superfamily protein
PLM3_60_coex_sep16_scaffold_526_16
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13740..15098)
DNA (1359bp) protein (453aa)
hydrolase Tax=Rhodococcus sp. DK17 RepID=UPI000312EF2C
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_526_17
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15124..15789)
DNA (666bp) protein (222aa)
Transcriptional regulator, ArsR family Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UUI8_9ACTO
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EGD43240.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
transcriptional regulator, ArsR family
PLM3_60_coex_sep16_scaffold_526_18
Kingella oralis, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15855..16382
DNA (528bp) protein (176aa)
Methyltransferase domain protein Tax=Kingella oralis ATCC 51147 RepID=C4GFM1_9NEIS
Methyltransferase domain protein {ECO:0000313|EMBL:EEP69026.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella oralis ATCC 51147.;"
methyltransferase
PLM3_60_coex_sep16_scaffold_526_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16429..17037
DNA (609bp) protein (203aa)
putative Methyltransferase type 11 (EC:2.1.1.137)
Methyltransferase type 11 bin=GWC2_Nitrospirae-rel_56_14 species=uncultured Nitrospirae bacterium MY2-3C genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_60_coex_sep16_scaffold_526_20
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17921..18784
DNA (864bp) protein (288aa)
Transcriptional regulator, LuxR family Tax=Frankia sp. CN3 RepID=G6HFI3_9ACTO
hypothetical protein
Large transcriptional regulator {ECO:0000313|EMBL:AIY18373.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
PLM3_60_coex_sep16_scaffold_526_21
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(18798..19559)
DNA (762bp) protein (254aa)
Transcriptional activator domain protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CJ21_THET1
transcriptional activator
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_60_coex_sep16_scaffold_526_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19559..21493)
DNA (1935bp) protein (645aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037D673C
ATPase-like protein
ATPase-like protein {ECO:0000313|EMBL:ACZ89499.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_526_23
unknown

Not on your lists

comp(21567..21668)
DNA (102bp) protein (34aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_526_24
unknown

Not on your lists

comp(21665..21988)
DNA (324bp) protein (108aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_526_25
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22156..22959
DNA (804bp) protein (268aa)
Conserved uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q090Y3_STIAD
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE {ECO:0000313|EMBL:EYF03837.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_526_26
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22998..23966)
DNA (969bp) protein (323aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily Tax=Saccharomonospora marina XMU15 RepID=H5X8I8_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KGN40353.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_526_27
unknown

Not on your lists

comp(24008..24139)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_526_28
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24195..25796)
DNA (1602bp) protein (534aa)
Transcriptional regulator, LuxR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2H7_CONWI
Uncharacterized protein {ECO:0000313|EMBL:AKE92448.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
LuxR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_526_29
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26269..26520
DNA (252bp) protein (84aa)
Putative uncharacterized protein Tax=Frankia sp. (strain EAN1pec) RepID=A8LAC2_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW12838.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_526_30
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26531..27568)
DNA (1038bp) protein (346aa)
Alcohol dehydrogenase GroES-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUM3_RUBXD
alcohol dehydrogenase GroES-like protein
Alcohol dehydrogenase GroES-like protein {ECO:0000313|EMBL:ABG04905.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Displaying items 1-30 of 49 in total

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