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PLM3_60_coex_sep16_scaffold_622

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_622_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

3..1649
DNA (1647bp) protein (549aa)
Adenylyl cyclase class-3/4/guanylyl cyclase bin=GWC2_Chloroflexi_73_18 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_622_2
unknown

Not on your lists

1715..1912
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_622_3
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1923..3161)
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YWB0_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD57531.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
PLM3_60_coex_sep16_scaffold_622_4
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3163..3573
DNA (411bp) protein (137aa)
msrB; methionine sulfoxide reductase (EC:1.8.4.11)
Methionine-R-sulfoxide reductase Tax=Frankia sp. QA3 RepID=I9KDS7_9ACTO
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EIV92213.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
PLM3_60_coex_sep16_scaffold_622_5
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3607..4827
DNA (1221bp) protein (407aa)
Uncharacterized protein Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYH0_PELTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF60953.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
PLM3_60_coex_sep16_scaffold_622_6
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4896..5807
DNA (912bp) protein (304aa)
Peptidase S54, rhomboid domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQE9_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KJK57872.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
peptidase S54, rhomboid domain-containing protein
PLM3_60_coex_sep16_scaffold_622_7
unknown

Not on your lists

comp(5788..6510)
DNA (723bp) protein (241aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_622_8
Amycolatopsis halophila, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6587..7504
DNA (918bp) protein (306aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis halophila YIM 93223.;"
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] bin=bin9_gal15 species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
selenide, water dikinase
PLM3_60_coex_sep16_scaffold_622_9
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7514..7891)
DNA (378bp) protein (126aa)
Cupin 2 conserved barrel domain protein Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SG15_INTC7
Cupin {ECO:0000313|EMBL:EWT04128.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
cupin
PLM3_60_coex_sep16_scaffold_622_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

7958..8452
DNA (495bp) protein (165aa)
Mov34/MPN/PAD-1 family protein bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
Mov34/MPN/PAD-1 family protein
Tax=CSP1_5_NC10
PLM3_60_coex_sep16_scaffold_622_11
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8452..8727
DNA (276bp) protein (92aa)
sulfur transfer protein ThiS Tax=Micromonospora sp. CNB394 RepID=UPI00037D0196
sulfur transfer protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ABV96901.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM3_60_coex_sep16_scaffold_622_12
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8732..9667
DNA (936bp) protein (312aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000313|EMBL:ABK53459.1}; EC=2.5.1.47 {ECO:0000313|EMBL:ABK53459.1};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
cysteine synthase Tax=Actinomadura atramentaria RepID=UPI00038037C0
PLM3_60_coex_sep16_scaffold_622_13
unknown

Not on your lists

9692..10444
DNA (753bp) protein (251aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_622_14
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10441..11229
DNA (789bp) protein (263aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI000346C4B1
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AIR97708.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
PLM3_60_coex_sep16_scaffold_622_15
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

11226..12023
DNA (798bp) protein (266aa)
ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH Tax=Isoptericola variabilis (strain 225) RepID=F6FQE0_ISOV2
Tax=RBG_13_Actinobacteria_55_18_curated
PLM3_60_coex_sep16_scaffold_622_16
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12020..12697
DNA (678bp) protein (226aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
Non-canonical purine NTP pyrophosphatase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPQ9_9FIRM
yggV; ribosomal protein
PLM3_60_coex_sep16_scaffold_622_17
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12652..13494)
DNA (843bp) protein (281aa)
Putative ABC transporter ATP-binding protein Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6R5H1_NOCCG
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCF62102.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
PLM3_60_coex_sep16_scaffold_622_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13517..14326)
DNA (810bp) protein (270aa)
Uncharacterized protein Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0X2_DELAS
hypothetical protein
ABC transporter permease {ECO:0000313|EMBL:EPD41574.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
PLM3_60_coex_sep16_scaffold_622_19
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14319..15098)
DNA (780bp) protein (260aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034B910F
ABC transporter permease {ECO:0000313|EMBL:KJK13896.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
ABC transporter
PLM3_60_coex_sep16_scaffold_622_20
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15169..16002
DNA (834bp) protein (278aa)
Cof-like hydrolase Tax=Frankia sp. (strain EuI1c) RepID=E3J7B5_FRASU
cof family hydrolase
Cof-like hydrolase {ECO:0000313|EMBL:ADP78388.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_622_21
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16252..17643
DNA (1392bp) protein (464aa)
FAD linked oxidase domain protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PUJ2_STANL
FAD linked oxidase-like protein {ECO:0000313|EMBL:CEL13167.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
FAD linked oxidase domain-containing protein
PLM3_60_coex_sep16_scaffold_622_22
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

17640..17960
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4QVF8_9ACTO
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_60_coex_sep16_scaffold_622_23
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17975..18832
DNA (858bp) protein (286aa)
NADP-dependent oxidoreductase domain protein Tax=Frankia sp. CN3 RepID=G6HHE1_9ACTO
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABW14680.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_622_24
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18829..19032
DNA (204bp) protein (68aa)
Helix-hairpin-helix motif protein Tax=Rhodococcus RepID=T1VW65_RHOER
helix-hairpin-helix motif protein
DNA-binding protein {ECO:0000313|EMBL:EQM35393.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis DN1.;"
PLM3_60_coex_sep16_scaffold_622_25
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19372..20364)
DNA (993bp) protein (331aa)
Uncharacterized protein Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZI3_PELTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF60586.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
PLM3_60_coex_sep16_scaffold_622_26
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20564..21478
DNA (915bp) protein (305aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6GE38_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM75904.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_622_27
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21766..22476)
DNA (711bp) protein (237aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00037D3E1E
Uncharacterized protein {ECO:0000313|EMBL:ETK37626.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_622_28
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22489..23040)
DNA (552bp) protein (184aa)
Deaminase-reductase domain-containing protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B8S6_STRRD
deaminase-reductase domain-containing protein
Deaminase-reductase domain-containing protein {ECO:0000313|EMBL:ACZ89682.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_622_29
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(23082..23858)
DNA (777bp) protein (259aa)
Hydrolase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTY6_9CHLR
Hydrolase {ECO:0000313|EMBL:EFH83887.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hydrolase
PLM3_60_coex_sep16_scaffold_622_30
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23961..24668
DNA (708bp) protein (236aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI00036B1674
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:ACZ90916.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
Displaying items 1-30 of 35 in total

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