name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_60_coex_sep16_scaffold_696_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(3..431)
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ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD Tax=Synechococcus sp. (strain WH8102) RepID=Q7TTU7_SYNPX
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_60_coex_sep16_scaffold_696_2
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(637..1218)
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Response regulator receiver modulated diguanylate cyclase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUD7_ACIC1
response regulator receiver modulated diguanylate cyclase
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:ABK53047.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
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PLM3_60_coex_sep16_scaffold_696_3
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(1444..2109)
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ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Ribulose-phosphate 3-epimerase Tax=Actinomadura madurae LIID-AJ290 RepID=U2PHB9_9ACTO
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PLM3_60_coex_sep16_scaffold_696_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(2162..3595)
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Fmu (Sun) domain protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJG3_NOCSJ
Fmu (Sun) domain-containing protein
Fmu (Sun) domain protein {ECO:0000313|EMBL:ABL81948.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
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PLM3_60_coex_sep16_scaffold_696_5
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(3592..4629)
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Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase Tax=Frankia sp. EUN1f RepID=D3CXL5_9ACTO
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PLM3_60_coex_sep16_scaffold_696_6
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(4639..5214)
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peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
Peptide deformylase Tax=Arthrobacter sp. (strain FB24) RepID=A0JVJ4_ARTS2
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PLM3_60_coex_sep16_scaffold_696_7
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(5229..7085)
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Probable primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
Primosomal protein N' (Replication factor Y) Tax=Frankia alni (strain ACN14a) RepID=Q0RF88_FRAAA
priA; primosome assembly protein PriA
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PLM3_60_coex_sep16_scaffold_696_8
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
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Not on your lists |
comp(7135..8328)
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S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
S-adenosylmethionine synthase Tax=Actinomadura madurae LIID-AJ290 RepID=U2MES9_9ACTO
S-adenosylmethionine synthetase
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PLM3_60_coex_sep16_scaffold_696_9
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8428..9627)
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Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EKP93741.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EKP93741.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EKP93741.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBJ9_9FIRM
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PLM3_60_coex_sep16_scaffold_696_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria
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Not on your lists |
comp(9630..9881)
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rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega Tax=Propionibacterium propionicum (strain F0230a) RepID=I6WSI4_PROPF
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
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PLM3_60_coex_sep16_scaffold_696_11
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(9878..10426)
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Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
guanylate kinase Tax=Curtobacterium ginsengisoli RepID=UPI0003B6D71B
guanylate kinase
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PLM3_60_coex_sep16_scaffold_696_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria
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Not on your lists |
comp(10524..10841)
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hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037A6E74
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
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PLM3_60_coex_sep16_scaffold_696_13
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria
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Not on your lists |
comp(11048..11758)
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orotate phosphoribosyltransferase, Thermus family (EC:2.4.2.10)
Orotate phosphoribosyltransferase bin=GWA2_Elusimicrobia_66_18 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=GWC2_Elusimicrobia_65_9_curated
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PLM3_60_coex_sep16_scaffold_696_14
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(11755..12600)
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orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Orotidine 5'-phosphate decarboxylase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A829_THECD
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PLM3_60_coex_sep16_scaffold_696_15
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12685..13593)
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dihydroorotate dehydrogenase protein (EC:1.3.98.1)
dihydroorotate oxidase Tax=Frankia sp. Iso899 RepID=UPI0003B72D01
Tax=CG_Delta_06
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PLM3_60_coex_sep16_scaffold_696_16
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(13605..14450)
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dihydroorotate oxidase B, electron transfer subunit (EC:1.3.98.1)
Dihydroorotate oxidase B, electron transfer subunit {ECO:0000313|EMBL:ABK53069.1}; EC=1.3.98.1 {ECO:0000313|EMBL:ABK53069.1};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Dihydroorotate oxidase B, electron transfer subunit Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUF9_ACIC1
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PLM3_60_coex_sep16_scaffold_696_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(14447..17701)
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carbamoyl-phosphate synthase large subunit (EC:6.3.4.16)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbamoyl-phosphate synthase large chain Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZG6_PSEUX
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PLM3_60_coex_sep16_scaffold_696_18
unknown
|
Not on your lists |
comp(17701..18261)
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This feature has no annotations |
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PLM3_60_coex_sep16_scaffold_696_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(18254..19351)
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Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
CspS Tax=uncultured organism RepID=K9LLE5_9ZZZZ
carbamoyl-phosphate synthase small subunit
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PLM3_60_coex_sep16_scaffold_696_20
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(19348..19881)
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Uncharacterized protein (Fragment) Tax=Frankia sp. QA3 RepID=I8QV94_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV96402.1}; Flags: Precursor; Fragment;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
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PLM3_60_coex_sep16_scaffold_696_21
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(19925..21208)
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Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RVJ0_BLASD
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PLM3_60_coex_sep16_scaffold_696_22
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(21205..22134)
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aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Aspartate carbamoyltransferase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A835_THECD
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PLM3_60_coex_sep16_scaffold_696_23
Deinococcus proteolyticus, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria
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Not on your lists |
comp(22172..22771)
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Bifunctional protein pyrR (EC:2.4.2.9)
Bifunctional protein PyrR Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RJB5_DEIPM
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 /; NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703).;"
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PLM3_60_coex_sep16_scaffold_696_24
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(22873..23517)
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hypothetical protein Tax=Actinomadura atramentaria RepID=UPI0003718119
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACZ84644.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
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PLM3_60_coex_sep16_scaffold_696_25
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(23505..24812)
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Histidine kinase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AE37_THECD
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACY99463.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
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PLM3_60_coex_sep16_scaffold_696_26
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(24929..25576)
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Transcriptional regulator, TetR family Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1TDU7_MYCVP
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABM15347.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1).;"
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PLM3_60_coex_sep16_scaffold_696_27
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(25573..26280)
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MmpL domain-containing protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AVD2_FRADG
MmpL domain-containing protein
MmpL domain-containing protein {ECO:0000313|EMBL:AEH08228.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
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