ggKbase home page

PLM3_60_coex_sep16_scaffold_734

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_734_1
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..3981)
DNA (3981bp) protein (1327aa)
Bacillopeptidase F Tax=Cystobacter fuscus DSM 2262 RepID=S9PQT6_9DELT
Bacillopeptidase F {ECO:0000313|EMBL:EPX65401.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_734_2
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

4144..5454
DNA (1311bp) protein (437aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
Two-component sensor histidine kinase Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NPN2_GLOVI
two-component sensor histidine kinase
PLM3_60_coex_sep16_scaffold_734_3
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5451..6113
DNA (663bp) protein (221aa)
Two component system response regulator Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HCQ8_STRPR
Two component system response regulator {ECO:0000313|EMBL:EDY64619.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_734_4
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6200..7699
DNA (1500bp) protein (500aa)
putative membrane protein bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_60_coex_sep16_scaffold_734_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7748..8290
DNA (543bp) protein (181aa)
GtrA family protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRW8_ACIC1
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:ABK52178.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_734_6
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8254..9018)
DNA (765bp) protein (255aa)
Dolichyl-phosphate beta-glucosyltransferase {ECO:0000313|EMBL:AEU38510.1}; EC=2.4.1.117 {ECO:0000313|EMBL:AEU38510.1};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036CB930
family 2 glycosyl transferase
PLM3_60_coex_sep16_scaffold_734_7
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9015..10952)
DNA (1938bp) protein (646aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI000361CF63
putative membrane protein (DUF2079)
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_60_coex_sep16_scaffold_734_8
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

11135..13384
DNA (2250bp) protein (750aa)
Tetratricopeptide repeat protein Tax=delta proteobacterium NaphS2 RepID=D8FBE3_9DELT
membrane protein
Tax=GWC2_SYX_53_9_curated
PLM3_60_coex_sep16_scaffold_734_9
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13499..14185
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WNI5_ACTMD
Cell division ATP-binding protein FtsE
Cell division protein FtsE {ECO:0000313|EMBL:KEI43342.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
PLM3_60_coex_sep16_scaffold_734_10
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14175..15092
DNA (918bp) protein (306aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000382869E
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_734_11
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

15108..15575
DNA (468bp) protein (156aa)
SsrA-binding protein Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V024_9PSEU
SsrA-binding protein
Tax=RBG_16_Zixibacteria_53_22_curated
PLM3_60_coex_sep16_scaffold_734_12
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15753..17336
DNA (1584bp) protein (528aa)
Alkaline phosphatase {ECO:0000313|EMBL:ACL43759.1}; EC=3.1.3.1 {ECO:0000313|EMBL:ACL43759.1};; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
Alkaline phosphatase Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HNM8_CYAP4
alkaline phosphatase
PLM3_60_coex_sep16_scaffold_734_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17746..17931)
DNA (186bp) protein (62aa)
Integrase family protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8Y1_GEOOG
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADB73624.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_734_14
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17958..18497)
DNA (540bp) protein (180aa)
Site-specific recombinase XerD Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RWU8_BLASD
xerD; site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CCG02160.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_60_coex_sep16_scaffold_734_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

18820..20064
DNA (1245bp) protein (415aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXH0_9CHLR
histidine kinase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_734_16

Not on your lists

comp(20145..20489)
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EBI0_GEOBB
Marine sediment metagenome DNA, contig: S06H3_S24853 {ECO:0000313|EMBL:GAI56628.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_734_17

Not on your lists

comp(20486..21448)
DNA (963bp) protein (321aa)
Uncharacterized protein Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RU59_9BACT
Marine sediment metagenome DNA, contig: S06H3_S16808 {ECO:0000313|EMBL:GAI36473.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_734_18
unknown

Not on your lists

comp(21894..22142)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_734_19
unknown

Not on your lists

22549..22758
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 19 items

View Taxonomy