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PLM3_60_coex_sep16_scaffold_753

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_753_1
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..258)
DNA (258bp) protein (86aa)
membrane protein Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00037BCE83
putative integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AAK47365.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh).;"
PLM3_60_coex_sep16_scaffold_753_2
unknown

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617..1213
DNA (597bp) protein (199aa)
hypothetical protein Tax=Nocardiopsis halotolerans RepID=UPI000367DA82
PLM3_60_coex_sep16_scaffold_753_3
unknown

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1306..2019
DNA (714bp) protein (238aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_753_4
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2188..3249
DNA (1062bp) protein (354aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262598E
Uncharacterized protein {ECO:0000313|EMBL:ETT43643.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
PLM3_60_coex_sep16_scaffold_753_5
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3499..4263
DNA (765bp) protein (255aa)
Family 3 adenylate cyclase Tax=Mycobacterium smegmatis JS623 RepID=L0J5A4_MYCSM
family 3 adenylate cyclase
Family 3 adenylate cyclase {ECO:0000313|EMBL:AGB25436.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM3_60_coex_sep16_scaffold_753_6
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4260..4640
DNA (381bp) protein (127aa)
Membrane spanning protein Tax=Streptomyces sp. C RepID=D9VNV8_9ACTO
Membrane spanning protein {ECO:0000313|EMBL:EFL16326.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
membrane protein
PLM3_60_coex_sep16_scaffold_753_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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4659..4955
DNA (297bp) protein (99aa)
hypothetical protein bin=bin9_gal15 species=Streptomyces zinciresistens genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Tax=CSP1_3_Armatimonadetes
PLM3_60_coex_sep16_scaffold_753_8
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4966..7044)
DNA (2079bp) protein (693aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00036590DC
ATP/GTP-binding protein
PLM3_60_coex_sep16_scaffold_753_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7137..8171)
DNA (1035bp) protein (345aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI00037212B6
Uncharacterized protein {ECO:0000313|EMBL:ETK37536.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
radical SAM domain-containing protein
PLM3_60_coex_sep16_scaffold_753_10
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8289..8822
DNA (534bp) protein (178aa)
Putative uncharacterized protein Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C3Q3_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ81962.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM3_60_coex_sep16_scaffold_753_11
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8840..9259)
DNA (420bp) protein (140aa)
Cupin 2 conserved barrel domain protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PTW2_KRIFD
Cupin 2 conserved barrel domain-containing protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADB33245.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_60_coex_sep16_scaffold_753_12
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9344..9940
DNA (597bp) protein (199aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036EE32A
Putative bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:CCH19284.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
deaminase-reductase domain-containing protein
PLM3_60_coex_sep16_scaffold_753_13
unknown

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comp(9950..10240)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_753_14
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10304..11395)
DNA (1092bp) protein (364aa)
Glutamate dehydrogenase/leucine dehydrogenase {ECO:0000313|EMBL:EKP93850.1}; EC=1.4.1.9 {ECO:0000313|EMBL:EKP93850.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
Glutamate dehydrogenase/leucine dehydrogenase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6NY98_9FIRM
Glu/Leu/Phe/Val dehydrogenase
PLM3_60_coex_sep16_scaffold_753_15
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11585..12898
DNA (1314bp) protein (438aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus; acidocaldarius).;"
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PB47_9ACTO
paaK; phenylacetate--CoA ligase
PLM3_60_coex_sep16_scaffold_753_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12974..14437)
DNA (1464bp) protein (488aa)
Restriction endonuclease Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8M6_9CHLR
Restriction endonuclease {ECO:0000313|EMBL:EFH80237.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
restriction endonuclease
PLM3_60_coex_sep16_scaffold_753_17
Streptomyces sp. NRRL B-1568, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14693..16042)
DNA (1350bp) protein (450aa)
hypothetical protein Tax=Streptomyces somaliensis RepID=UPI00029B53AB
Uncharacterized protein {ECO:0000313|EMBL:KJY42957.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL B-1568.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_753_18
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

16331..19174
DNA (2844bp) protein (948aa)
UvrD/REP helicase bin=GWC2_Methylomirabilis_70_16 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
UvrD/REP helicase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_753_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

19186..20631
DNA (1446bp) protein (482aa)
RNA-splicing ligase RtcB Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F2N9_VERMA
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_753_20
unknown

Not on your lists

20704..20868
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_753_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20876..21562
DNA (687bp) protein (229aa)
Erythromycin esterase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZC8_PSEUX
erythromycin esterase
Erythromycin esterase {ECO:0000313|EMBL:AEA25659.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_753_22
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21641..22318)
DNA (678bp) protein (226aa)
Putative phosphoglycerate mutase Tax=Janibacter sp. HTCC2649 RepID=A3THN8_9MICO
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:KGN29598.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
phosphoglycerate mutase
PLM3_60_coex_sep16_scaffold_753_23
unknown

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22344..22886
DNA (543bp) protein (181aa)

This feature has no annotations

Displaying 23 items

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