ggKbase home page

PLM3_60_coex_sep16_scaffold_7004

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7004_1
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..253
DNA (252bp) protein (84aa)
Daunorubicin resistance ABC transporter ATP-binding subunit Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AY78_STRRD
ABC transporter {ECO:0000313|EMBL:AJE42239.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
daunorubicin resistance ABC transporter ATP-binding subunit
PLM3_60_coex_sep16_scaffold_7004_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

273..911
DNA (639bp) protein (213aa)
ABC-2 type transporter Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AY77_STRRD
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_7004_3
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1015..2706)
DNA (1692bp) protein (564aa)
GTP-binding protein HSR1-related protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SGK8_GEOOG
GTP-binding protein HSR1-like protein
GTP-binding protein HSR1-related protein {ECO:0000313|EMBL:ADB72890.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_7004_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2715..4193)
DNA (1479bp) protein (493aa)
Putative ABC transporter Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SGK7_GEOOG
putative ABC transporter
Putative ABC transporter {ECO:0000313|EMBL:ADB72889.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_7004_5
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4355..4627
DNA (273bp) protein (91aa)
transglycosylase Tax=Streptomyces violaceoniger RepID=UPI0003C765F6
Uncharacterized protein {ECO:0000313|EMBL:EMF57562.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 25435.;"
transglycosylase-associated protein
PLM3_60_coex_sep16_scaffold_7004_6
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4629..7445)
DNA (2817bp) protein (939aa)
SMC domain protein Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9YYX1_9NEIS
SMC domain protein {ECO:0000313|EMBL:EEG10324.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
RecF/RecN/SMC N-terminal domain-containing protein
PLM3_60_coex_sep16_scaffold_7004_7
unknown

Not on your lists

comp(7442..8017)
DNA (576bp) protein (192aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_7004_8
unknown

Not on your lists

comp(8014..9015)
DNA (1002bp) protein (334aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_7004_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9396..10970)
DNA (1575bp) protein (525aa)
4-coumarate--CoA ligase (EC:6.2.1.12)
4-coumarate--CoA ligase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH91_RHOMR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_7004_10
unknown

Not on your lists

11083..11625
DNA (543bp) protein (181aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_7004_11
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11638..13035)
DNA (1398bp) protein (466aa)
PREDICTED: hypothetical protein Tax=Saccoglossus kowalevskii RepID=UPI0001CBAABC
FHA domain-containing protein {ECO:0000313|EMBL:CDP85315.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
M50A family peptidase
PLM3_60_coex_sep16_scaffold_7004_12
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13170..14390
DNA (1221bp) protein (407aa)
Glycogen synthase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FHC2_VERMA
glycogen synthase
Glycogen synthase {ECO:0000313|EMBL:AEB43900.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM3_60_coex_sep16_scaffold_7004_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14387..14809
DNA (423bp) protein (141aa)
Alpha/beta hydrolase fold protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4W0_CONWI
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB48538.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 13 items

View Taxonomy