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PLM3_60_coex_sep16_scaffold_738_18

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 20312..20989

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family Tax=Frankia sp. CN3 RepID=G6HIZ0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 225.0
  • Bit_score: 379
  • Evalue 1.30e-102
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 225.0
  • Bit_score: 377
  • Evalue 1.90e-102
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABW16480.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 225.0
  • Bit_score: 377
  • Evalue 9.20e-102

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GTGAGCATCCGTGTCGCCGTGGTCGACGACCAGGCGCTGGTCCGCGGTGGGTTCGCCATGGTGCTGCGGATCCACGACGACATCGAGGTCGTCGCCGAGGCCGGGACCGGGATCGAGGCGATCGAAGTGGCACGCCGGCACCGTCCCGACGTGATCCTCATGGACATCCGGATGCCCGACATGGACGGCCTGGAGGCGACTTCCAGGATCCTGGCCGAGGCCGACTGGAACGTCCGGGTCCTGATCCTGACCACGTTCGACCCGGACGAGTACGTCTACAAGGCACTGCGCGCCGGTGCCAGCGGCTTCGTGCTCAAGGACATCCCCCCCGACCAGCTCGCCACCGCCGTCCGGACCGTGGCCGACGGCGGGGCGCTGCTGGCGCCGTCGATCACCCGGCGGCTCATCGGCCAGTTCACGGAGCGCCTCACCGTCGACGCCGCCGTCGCACGTCGCCTGGAGCGCCTCACCGACCGGGAGCGCGAGGTGGTGGTCGCCGCCGCCCGGGGATCCAGCAACGCGGAGATCGCCGAGGAGCTCTTCATCGGACCCGCGACCGTGAAGTCGCACGTGTCGAGCATCCTCACCAAGCTCGGCCTGCGCGACCGCGCCCAGGTCGTGGTCTTCGCCTACGAGAGCGGGCTCGTCGAGGCCGGCGACCGCGACATCGGTCACTGA
PROTEIN sequence
Length: 226
VSIRVAVVDDQALVRGGFAMVLRIHDDIEVVAEAGTGIEAIEVARRHRPDVILMDIRMPDMDGLEATSRILAEADWNVRVLILTTFDPDEYVYKALRAGASGFVLKDIPPDQLATAVRTVADGGALLAPSITRRLIGQFTERLTVDAAVARRLERLTDREREVVVAAARGSSNAEIAEELFIGPATVKSHVSSILTKLGLRDRAQVVVFAYESGLVEAGDRDIGH*