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PLM3_60_coex_sep16_scaffold_602_25

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 24247..24945

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 231.0
  • Bit_score: 360
  • Evalue 1.60e-96
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.5.1) similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 232.0
  • Bit_score: 359
  • Evalue 7.10e-97
Succinate dehydrogenase subunit B Tax=Frankia sp. (strain CcI3) RepID=Q2JF80_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 232.0
  • Bit_score: 359
  • Evalue 2.50e-96

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
GTGGACGTCACGCTACGGATCCGCCGGTTCAACCCGGAGACCGACTCCGGGTCGCGGGTCGAGACCTACGAGGTCCCGGCCGACCCGATGGACCGCGTGCTCGACCTGCTCCACTGGGTCAAGTGGAACGTGGACGGGTCGCTCACCTTCCGGCGCTCCTGCGCGCACGGGATCTGCGGCTCGGACGCCATGCTCATCAACGGCACCAACCGGCTCGCCTGCAAGGTCCTGGTCCGCGAGGTCGGCGACCAGATCACCGTGGAGCCGTTGCGCGGCCTGCCGGTGGCCAAGGACCTGCTGGTGGACATGGAGCCGTTCTTCGCCTCCTACCGGGAGGCCATGCCCTTCCTGATCAACGACGAGCCGGCCCCCGACACCGAGCGTCGCCAGTCGCAGCAGGAGCGGGAGCGCTTCGACGACACCACCAAGTGCATCCTCTGCGCCGCCTGCACCACCTCCTGCCCGGTGTTCTGGGCCGACGAGGAGTACTTCGGGCCGGCGGCGATCGTCAACGCCCACCGCTTCATCTTCGACTCTCGCGACCGGGGCGCCGCCGAGCGGCTCACGGTGCTGAACGACAAGGAGGGGGTGTGGCGCTGCCGCACCACCTTCAACTGCACCGACGCCTGCCCGAGGGGCATCAAGGTGACCCAGGCGATCCAGGAGGTCAAGCGCGCCCTGCTGTTCCGCAAGGCGTGA
PROTEIN sequence
Length: 233
VDVTLRIRRFNPETDSGSRVETYEVPADPMDRVLDLLHWVKWNVDGSLTFRRSCAHGICGSDAMLINGTNRLACKVLVREVGDQITVEPLRGLPVAKDLLVDMEPFFASYREAMPFLINDEPAPDTERRQSQQERERFDDTTKCILCAACTTSCPVFWADEEYFGPAAIVNAHRFIFDSRDRGAAERLTVLNDKEGVWRCRTTFNCTDACPRGIKVTQAIQEVKRALLFRKA*