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PLM3_60_coex_sep16_scaffold_602

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_602_1
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1144)
DNA (1143bp) protein (381aa)
Rieske 2Fe-2S domain protein Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QQ78_MYCS2
(2Fe-2S)-binding protein
Rieske (2Fe-2S) region {ECO:0000313|EMBL:AFP37121.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
PLM3_60_coex_sep16_scaffold_602_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1234..1854
DNA (621bp) protein (207aa)
Putative transcriptional regulator, TetR family Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5M9_STRRD
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:ACZ89534.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_602_3
unknown

Not on your lists

comp(1873..2124)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_602_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2103..3263)
DNA (1161bp) protein (387aa)
sarcosine oxidase (EC:1.5.3.1)
FAD dependent oxidoreductase Tax=Cordyceps militaris (strain CM01) RepID=G3J2V1_CORMM
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:EXG82863.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM3_60_coex_sep16_scaffold_602_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3260..4417)
DNA (1158bp) protein (386aa)
Rieske (2Fe-2S) domain protein Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWV5_9GAMM
Rieske (2Fe-2S) domain-containing protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_602_6
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4446..6071)
DNA (1626bp) protein (542aa)
FAD dependent oxidoreductase Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PZK0_STANL
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADD41674.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM3_60_coex_sep16_scaffold_602_7
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6079..7197)
DNA (1119bp) protein (373aa)
Putative peptide transport ATP-binding protein Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q9Z531_STRCO
SC9F2.04; ABC transporter ATP-binding protein
Putative peptide transport ATP-binding protein {ECO:0000313|EMBL:CAB37471.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).;"
PLM3_60_coex_sep16_scaffold_602_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7194..8177)
DNA (984bp) protein (328aa)
peptide ABC transporter ATPase Tax=Nonomuraea coxensis RepID=UPI0003640DCB
ABC transporter ATP-binding protein
ABC transporter, ATP-binding component {ECO:0000313|EMBL:ACZ85070.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_602_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(8180..9121)
DNA (942bp) protein (314aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036185F9
peptide transport permease
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_602_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9121..10137)
DNA (1017bp) protein (339aa)
ABC transporter permease Tax=Saccharopolyspora spinosa RepID=UPI00023792A0
ABC transporter permease {ECO:0000313|EMBL:ETK35278.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
peptide transport system permease
PLM3_60_coex_sep16_scaffold_602_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10150..10758)
DNA (609bp) protein (203aa)
Extracellular solute-binding protein family 5 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WAP1_ACTMD
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETK35279.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
family 5 extracellular solute-binding protein
PLM3_60_coex_sep16_scaffold_602_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

11205..11441
DNA (237bp) protein (79aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_60_coex_sep16_scaffold_602_13
unknown

Not on your lists

11694..12014
DNA (321bp) protein (107aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_602_14
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12008..13420)
DNA (1413bp) protein (471aa)
pyridine nucleotide-disulfide oxidoreductase Tax=Nonomuraea coxensis RepID=UPI00036056A1
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGN30403.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
PLM3_60_coex_sep16_scaffold_602_15
unknown

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comp(13441..13608)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_602_16
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13671..15263)
DNA (1593bp) protein (531aa)
Methylmalonyl-CoA mutase Tax=Streptomyces niveus NCIMB 11891 RepID=V6KHR7_STRNV
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EST28539.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
methylmalonyll-CoA mutase
PLM3_60_coex_sep16_scaffold_602_17
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

15351..15812
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EJ27_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84689.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_602_18
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15831..17522)
DNA (1692bp) protein (564aa)
Serine/threonine protein kinase (Fragment) Tax=Streptomyces sviceus ATCC 29083 RepID=D6XAK6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF70167.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM3_60_coex_sep16_scaffold_602_19
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17565..19256)
DNA (1692bp) protein (564aa)
Serine/threonine protein kinase Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X379_SALTO
protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABP53329.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM3_60_coex_sep16_scaffold_602_20
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19331..19741)
DNA (411bp) protein (137aa)
Putative uncharacterized protein Tax=Streptomyces sp. C RepID=D9VR91_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFL16637.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
transposase, IS605 OrfB family
PLM3_60_coex_sep16_scaffold_602_21
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19845..21482)
DNA (1638bp) protein (546aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00037EDEA0
serine/threonine protein kinase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KIZ19208.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
PLM3_60_coex_sep16_scaffold_602_22
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21617..21991
DNA (375bp) protein (125aa)
Succinate dehydrogenase, cytochrome b556 subunit Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AY03_FRADG
succinate dehydrogenase, cytochrome b556 subunit
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:AEH08502.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_602_23
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21995..22390
DNA (396bp) protein (132aa)
Succinate dehydrogenase subunit D Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IZ61_9PSEU
Succinate dehydrogenase, hydrophobic anchor subunit {ECO:0000313|EMBL:EHR49124.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_602_24
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22401..24134
DNA (1734bp) protein (578aa)
succinate dehydrogenase, flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
Succinate dehydrogenase, flavoprotein subunit Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AY01_FRADG
PLM3_60_coex_sep16_scaffold_602_25
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24247..24945
DNA (699bp) protein (233aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.5.1)
Succinate dehydrogenase subunit B Tax=Frankia sp. (strain CcI3) RepID=Q2JF80_FRASC
PLM3_60_coex_sep16_scaffold_602_26
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(24959..25825)
DNA (867bp) protein (289aa)
hypothetical protein Tax=Cellulomonas sp. JC225 RepID=UPI0003051FFC
ABC-type transporter, ATP-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_602_27
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(25822..26631)
DNA (810bp) protein (270aa)
hypothetical protein Tax=Cellulomonas sp. JC225 RepID=UPI0002E7CF79
ABC transporter ATP-binding protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_60_coex_sep16_scaffold_602_28
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26649..27710)
DNA (1062bp) protein (354aa)
ABC-2 type transporter Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PYC0_CATAD
ABC transporter permease {ECO:0000313|EMBL:EWM10196.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
ABC transporter
PLM3_60_coex_sep16_scaffold_602_29
unknown

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comp(27797..28033)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_602_30
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27991..28422)
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=Frankia sp. (strain EAN1pec) RepID=A8KZM4_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW16004.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Displaying items 1-30 of 33 in total

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