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PLM3_60_coex_sep16_scaffold_867_7

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(5360..5938)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3X4_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 151.0
  • Bit_score: 147
  • Evalue 1.20e-32
Uncharacterized protein {ECO:0000313|EMBL:ETK32987.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 161.0
  • Bit_score: 215
  • Evalue 4.00e-53
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 151.0
  • Bit_score: 147
  • Evalue 3.50e-33

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 579
TTGCGCCGGCGCTCCACCGAGGGACTCGACGCGGAGTTCTCGGCCTTCGTGCACCGGCGGGCTCGCCGTCACCTCCGCACCGCGGTGCTGCTCACGGGCGACTGGCACACCGCGGAGGACCTGGTGCAGACGTGCCTGGTCAAGCTGTACCGCGCCTGGCCTCGGCTGGACACGGGCGTGGACCCCGACGCCTACCTGCGCCGCATGCTGATCAACACCCGCCGCTCGTGGTGGCGGGTCGGGTGCCGGCGGGAAGCCCCCGTGGCCAGCGTCCCCGACCGAGCGGGCGAGGCCGACGGCCAGGACCGGCACGCCGTCGCGGAGTCGGTGCGGCAGGCGCTCGGCGCGCTGCCGGCTCGGCAGCGGGCCGCGCTGGTGCTGCGCTTCTTCGAGGACCTGCCCGAGGCGCAGGTCGCCGACCTGCTCGGCTGCTCGGTCGGGACGGTCGAGACCCACACCCACCGCGGCATCCGGAGGCTCCGGGAGCTCTTAGGCGACGAGCTCGTCCCCGAGGACCCGGGACCGGAGCTGGACCGCGTTGTCAACGGGCTCCCCGGCCAGCGGCGTGACAGCGGATGA
PROTEIN sequence
Length: 193
LRRRSTEGLDAEFSAFVHRRARRHLRTAVLLTGDWHTAEDLVQTCLVKLYRAWPRLDTGVDPDAYLRRMLINTRRSWWRVGCRREAPVASVPDRAGEADGQDRHAVAESVRQALGALPARQRAALVLRFFEDLPEAQVADLLGCSVGTVETHTHRGIRRLRELLGDELVPEDPGPELDRVVNGLPGQRRDSG*