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PLM3_60_coex_sep16_scaffold_867

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_867_1
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..703)
DNA (702bp) protein (234aa)
Fe-S cluster assembly protein SufB Tax=Corynebacterium capitovis RepID=UPI00037945B5
FeS assembly protein SufB {ECO:0000313|EMBL:EHR51493.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
Iron-regulated ABC transporter membrane component SufB
PLM3_60_coex_sep16_scaffold_867_2

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comp(703..1398)
DNA (696bp) protein (232aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003665958
Bacterial regulatory protein, arsR family {ECO:0000313|EMBL:AIA14073.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative transcriptional regulator
PLM3_60_coex_sep16_scaffold_867_3
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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1516..2283
DNA (768bp) protein (256aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Putative Dihydrodipicolinate synthase {ECO:0000313|EMBL:CCH87611.1}; EC=4.2.1.52 {ECO:0000313|EMBL:CCH87611.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Putative Dihydrodipicolinate synthase Tax=Modestobacter marinus (strain BC501) RepID=I4EW48_MODMB
PLM3_60_coex_sep16_scaffold_867_4
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2312..3754)
DNA (1443bp) protein (481aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XJI8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EWT01096.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
BNR/Asp-box repeat-containing protein
PLM3_60_coex_sep16_scaffold_867_5
unknown

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4051..4236
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_867_6
unknown

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comp(4396..5319)
DNA (924bp) protein (308aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_867_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5360..5938)
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3X4_STRRD
Uncharacterized protein {ECO:0000313|EMBL:ETK32987.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM3_60_coex_sep16_scaffold_867_8
unknown

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5981..6250
DNA (270bp) protein (90aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_867_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(6255..7007)
DNA (753bp) protein (251aa)
dienelactone hydrolase-like enzyme (EC:3.1.1.45)
Carboxymethylenebutenolidase, putative bin=GWC2_Chloroflexi_73_18 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_867_10
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7036..7665
DNA (630bp) protein (210aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000366DC75
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT63479.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
PLM3_60_coex_sep16_scaffold_867_11
unknown

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comp(7912..8478)
DNA (567bp) protein (189aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_867_12
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8682..9902)
DNA (1221bp) protein (407aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI000372E708
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCK31820.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM3_60_coex_sep16_scaffold_867_13
unknown

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comp(9979..10119)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_867_14
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10119..10451)
DNA (333bp) protein (111aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI00036BF7B6
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EAX46385.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
sodium/hydrogen exchanger
PLM3_60_coex_sep16_scaffold_867_15
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10792..11922)
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0Q5Q5_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL27318.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
PLM3_60_coex_sep16_scaffold_867_16
unknown

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12369..12659
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_867_17
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(12662..16003)
DNA (3342bp) protein (1114aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
Putative ATP-dependent DNA helicase Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NGN4_KITSK
putative ATP-dependent DNA helicase
PLM3_60_coex_sep16_scaffold_867_18
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(16000..17250)
DNA (1251bp) protein (417aa)
ATP-dependent DNA helicase Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XA31_MYCNE
ATP-dependent DNA helicase
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3_60_coex_sep16_scaffold_867_19
unknown

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17270..18208
DNA (939bp) protein (313aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_867_20
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19155..19733
DNA (579bp) protein (193aa)
Micrococcal nuclease-like protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LW6_SYMTH
micrococcal nuclease-like protein
Micrococcal nuclease-like protein {ECO:0000313|EMBL:BAD41330.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
Displaying 20 items

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