ggKbase home page

PLM3_60_coex_sep16_scaffold_797_25

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 26671..27090

Top 3 Functional Annotations

Value Algorithm Source
Putative transposase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT43_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 125.0
  • Bit_score: 210
  • Evalue 8.60e-52
Putative transposase of IS4/5 family (DUF4096) similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 125.0
  • Bit_score: 212
  • Evalue 4.90e-53
Putative transposase of IS4/5 family (DUF4096) {ECO:0000313|EMBL:AHY47382.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 125.0
  • Bit_score: 212
  • Evalue 2.40e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter radiotolerans → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GTGGTCGGCCGCGGAGAACTCACCGATACCGCCTGGGCGCAGCTCGCACCGCTGCTGCCACGTAACCGCCAGCGCGGCGGCCGCTGGCGAGACCACCGCACGGTCATCAACGGGATCCTGTGGAAGCTGCGCACCGGCGCGCCCTGGCGCGACCTGCCCGAGCGCTACGGCCCCTGGAAGACCTGCTACGACCGCTTCGTCAGATGGCGCCAAGACGGCACCTGGGACCGGCTGCTGGCCCACGTGCAGACCAAGTCCGACGCGGTTGGCGAGCTGGAGTGGGTCGTCAGCGTGGACAGCAGCAGCGTGCGCGCCCACCAGCACGCCGCCGGCGCGCGCAAGCAGGCTGGCAGCGCCGACCGTAAAAGGGGATCTGCCATGACCCGCTTGAGGCGCTCGGTCGGTCCCGGGGTGGGCTGA
PROTEIN sequence
Length: 140
VVGRGELTDTAWAQLAPLLPRNRQRGGRWRDHRTVINGILWKLRTGAPWRDLPERYGPWKTCYDRFVRWRQDGTWDRLLAHVQTKSDAVGELEWVVSVDSSSVRAHQHAAGARKQAGSADRKRGSAMTRLRRSVGPGVG*