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PLM3_60_coex_sep16_scaffold_797

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_797_1
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1027
DNA (1026bp) protein (342aa)
Transposase Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=B5GSC5_STRC2
Rhodopirellula transposase {ECO:0000313|EMBL:EFG07652.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
transposase
PLM3_60_coex_sep16_scaffold_797_2
unknown

Not on your lists

comp(1128..2441)
DNA (1314bp) protein (438aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_797_3
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2438..2953)
DNA (516bp) protein (172aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Frankia sp. (strain EAN1pec) RepID=A8LB95_FRASN
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABW09556.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_797_4
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3141..4244)
DNA (1104bp) protein (368aa)
Uncharacterized protein Tax=Streptomyces collinus Tu 365 RepID=S5UYK3_STRCU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS72368.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
PLM3_60_coex_sep16_scaffold_797_5
Streptomyces sp. SPB74, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4870..5310
DNA (441bp) protein (147aa)
hypothetical protein Tax=Saccharopolyspora spinosa RepID=UPI000237B406
Vegetative cell wall protein gp1 {ECO:0000313|EMBL:EDY42077.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB74).;"
vegetative cell wall protein gp1
PLM3_60_coex_sep16_scaffold_797_6
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5390..6148
DNA (759bp) protein (253aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003716F6E
two-component system histidine kinase
PLM3_60_coex_sep16_scaffold_797_7
unknown

Not on your lists

comp(6312..7433)
DNA (1122bp) protein (374aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_797_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7583..9316)
DNA (1734bp) protein (578aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ASA3_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ86630.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_797_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10162..10890)
DNA (729bp) protein (243aa)
Methyltransferase type 11 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TV81_9CHLR
s-adenosylmethionine (SAM)-dependent methyltransferase
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM3_60_coex_sep16_scaffold_797_10
unknown

Not on your lists

comp(11198..11518)
DNA (321bp) protein (107aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_797_11
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

11643..12206
DNA (564bp) protein (188aa)
Acetyltransferase, ribosomal protein N-acetylase Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QK61_NOSS7
acetyltransferase, ribosomal protein N-acetylase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_60_coex_sep16_scaffold_797_12
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12306..13889)
DNA (1584bp) protein (528aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HAN7_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL90074.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_60_coex_sep16_scaffold_797_13
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14217..15803
DNA (1587bp) protein (529aa)
FG-GAP repeat-containing protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2E8_MYXSD
Putative integrin-like protein {ECO:0000313|EMBL:KIG15359.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
FG-GAP repeat protein
PLM3_60_coex_sep16_scaffold_797_14
unknown

Not on your lists

16040..16234
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_797_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16234..17163
DNA (930bp) protein (310aa)
Uncharacterized protein {ECO:0000313|EMBL:CEL16476.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
PLM3_60_coex_sep16_scaffold_797_16
unknown

Not on your lists

17160..17954
DNA (795bp) protein (265aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_797_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(18068..19009)
DNA (942bp) protein (314aa)
GNAT family acetyltransferase Tax=Paenibacillus mucilaginosus 3016 RepID=H6NFD2_9BACL
GNAT family acetyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_797_18
unknown

Not on your lists

19719..20084
DNA (366bp) protein (122aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_797_19
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20154..21161)
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=Frankia alni (strain ACN14a) RepID=Q0RCT0_FRAAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ64744.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM3_60_coex_sep16_scaffold_797_20
unknown

Not on your lists

comp(21158..22012)
DNA (855bp) protein (285aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_797_21
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22236..23783)
DNA (1548bp) protein (516aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI0003677F76
transcriptional regulator, SARP family
Transcriptional regulator, SARP family {ECO:0000313|EMBL:AGM07058.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM3_60_coex_sep16_scaffold_797_22
unknown

Not on your lists

24045..24296
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_797_23
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24334..25293)
DNA (960bp) protein (320aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00035DD276
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB77495.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_797_24
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25410..26420)
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Streptomyces sp. SS RepID=UPI00030925D4
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:EDY64709.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_797_25
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

26671..27090
DNA (420bp) protein (140aa)
Putative transposase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT43_RUBXD
Putative transposase of IS4/5 family (DUF4096)
Putative transposase of IS4/5 family (DUF4096) {ECO:0000313|EMBL:AHY47382.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_60_coex_sep16_scaffold_797_26
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

27138..27539
DNA (402bp) protein (134aa)
Transposase, IS4 family Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT51_RUBXD
Transposase DDE domain
Transposase DDE domain {ECO:0000313|EMBL:AHY47305.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_60_coex_sep16_scaffold_797_27
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28896..30158)
DNA (1263bp) protein (421aa)
Putative two-component system sensor kinase putative membrane protein Tax=Frankia alni (strain ACN14a) RepID=Q0RMV2_FRAAA
two-component system sensor kinase (fragment)
Putative two-component system sensor kinase putative membrane protein {ECO:0000313|EMBL:CAJ61144.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM3_60_coex_sep16_scaffold_797_28
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30384..30602)
DNA (219bp) protein (73aa)
DNA binding domain protein, excisionase family Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZX6_CELFA
excisionase family DNA binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:AEE47292.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
PLM3_60_coex_sep16_scaffold_797_29
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30720..31019)
DNA (300bp) protein (100aa)
UPI0003CFD06D related cluster Tax=unknown RepID=UPI0003CFD06D
Uncharacterized protein {ECO:0000313|EMBL:ESZ30568.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
PLM3_60_coex_sep16_scaffold_797_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31249..31989)
DNA (741bp) protein (247aa)
Putative uncharacterized protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMK1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58059.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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