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PLM4_32_b1_sep16_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_0_1
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1286
DNA (1284bp) protein (428aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YLM6_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX31009.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
peptidase
PLM4_32_b1_sep16_scaffold_0_2
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1283..2446
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Microscilla marina ATCC 23134 RepID=A1ZNK5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY28116.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
PLM4_32_b1_sep16_scaffold_0_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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2456..3247
DNA (792bp) protein (264aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM4_32_b1_sep16_scaffold_0_4
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3427..5205
DNA (1779bp) protein (593aa)
AMP-dependent synthetase {ECO:0000313|EMBL:KFC58588.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KFC58588.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
AMP-dependent synthetase/ligase Tax=Flavobacterium sp. F52 RepID=J0RVP9_9FLAO
AMP-dependent synthetase/ligase
PLM4_32_b1_sep16_scaffold_0_5
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5482..6510
DNA (1029bp) protein (343aa)
Proline iminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; Short=PIP {ECO:0000256|PIRNR:PIRNR005539};; EC=3.4.11.5 {ECO:0000256|PIRNR:PIRNR005539};; Prolyl aminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002D81760
proline iminopeptidase
PLM4_32_b1_sep16_scaffold_0_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6702..7085
DNA (384bp) protein (128aa)
hypothetical protein Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI0003796273
Uncharacterized protein {ECO:0000313|EMBL:KIA86437.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_7
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7513..7980
DNA (468bp) protein (156aa)
MarR family transcriptional regulator Tax=Flavobacterium sp. F52 RepID=J1KNV5_9FLAO
MarR family transcriptional regulator {ECO:0000313|EMBL:KFC58589.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
MarR family transcriptional regulator
PLM4_32_b1_sep16_scaffold_0_8
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7964..10354
DNA (2391bp) protein (797aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AIG32754.1}; Enoyl-CoA hydratase {ECO:0000313|EMBL:AIJ37577.1}; EC=1.1.1.35 {ECO:0000313|EMBL:AIJ37577.1};; EC=4.2.1.17 {ECO:0000313|EMBL:AIJ37577.1};; EC=5.3.3.8 {ECO:0000313|EMBL:AIJ37577.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H0B7_FLAPJ
3-hydroxyacyl-CoA dehydrogenase
PLM4_32_b1_sep16_scaffold_0_9
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10448..11629
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AKC16304.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AKC16304.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
Acetyl-CoA C-acyltransferase Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H0B9_FLAPJ
PLM4_32_b1_sep16_scaffold_0_10
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11885..12250
DNA (366bp) protein (122aa)
S23 ribosomal protein Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3S2_9FLAO
S23 ribosomal protein {ECO:0000313|EMBL:KFF14910.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_11
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12328..14118
DNA (1791bp) protein (597aa)
Acyl-CoA dehydrogenase, very-long-chain specific (EC:1.3.8.9)
Acyl-CoA dehydrogenase, very-long-chain specific {ECO:0000313|EMBL:AIJ37574.1}; EC=1.3.8.9 {ECO:0000313|EMBL:AIJ37574.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
Acyl-CoA dehydrogenase family protein Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H0C0_FLAPJ
PLM4_32_b1_sep16_scaffold_0_12
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14458..15525)
DNA (1068bp) protein (356aa)
Uncharacterized protein Tax=Flavobacterium limnosediminis JC2902 RepID=V6SZT9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC58055.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
putative permease
PLM4_32_b1_sep16_scaffold_0_13
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(15565..16269)
DNA (705bp) protein (235aa)
Ion transport 2 domain-containing protein Tax=Flavobacterium enshiense DK69 RepID=V6SDB4_9FLAO
Ion transport 2 domain-containing protein {ECO:0000313|EMBL:KFC58056.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Ion transport 2 domain-containing protein
PLM4_32_b1_sep16_scaffold_0_14
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16316..17884)
DNA (1569bp) protein (523aa)
Uncharacterized protein Tax=Flavobacterium limnosediminis JC2902 RepID=V6ST96_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU29938.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_15
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18120..19184)
DNA (1065bp) protein (355aa)
Multidrug resistance efflux pump Tax=Flavobacterium sp. F52 RepID=J1KNQ4_9FLAO
Multidrug transporter {ECO:0000313|EMBL:KFC58059.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
multidrug resistance efflux pump
PLM4_32_b1_sep16_scaffold_0_16
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19194..20531)
DNA (1338bp) protein (446aa)
Outer membrane protein Tax=Flavobacterium sp. F52 RepID=J0RL63_9FLAO
Outer membrane protein {ECO:0000313|EMBL:KFC58060.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
outer membrane protein
PLM4_32_b1_sep16_scaffold_0_17
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20698..21618)
DNA (921bp) protein (307aa)
Uncharacterized protein Tax=Flavobacterium sp. F52 RepID=J0RLB0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC58061.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_18
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21762..22517)
DNA (756bp) protein (252aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNC3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KFC58062.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_19
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22748..23230)
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FAK8_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KFC58063.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23370..24524)
DNA (1155bp) protein (385aa)
Outer membrane protein/protective antigen OMA87 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R411_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:GAO41115.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
outer membrane protein/protective antigen OMA87
PLM4_32_b1_sep16_scaffold_0_21
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24602..25870)
DNA (1269bp) protein (423aa)
Surface antigen (D15) Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEE6_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KFC58064.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
surface antigen (D15)
PLM4_32_b1_sep16_scaffold_0_22
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26224..26568)
DNA (345bp) protein (115aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI00035EDFAE
Uncharacterized protein {ECO:0000313|EMBL:GAL83857.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_23
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26576..27094)
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FAK9_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KIA86432.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_24
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27185..27613)
DNA (429bp) protein (143aa)
DUF306 protein Tax=Flavobacterium limnosediminis JC2902 RepID=V6SJG1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC58066.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_25
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27743..28267
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Winogradskyella psychrotolerans RS-3 RepID=S7XDR1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC58068.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_26
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28341..28868
DNA (528bp) protein (176aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Superoxide dismutase [Cu-Zn] Tax=Flavobacterium sp. CF136 RepID=J3C059_9FLAO
superoxide dismutase, copper/zinc binding
PLM4_32_b1_sep16_scaffold_0_27
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28886..29455
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Flavobacterium cauense R2A-7 RepID=V6RXM4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA86428.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_28
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29591..30814
DNA (1224bp) protein (408aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA86427.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Uncharacterized protein bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
hypothetical protein
PLM4_32_b1_sep16_scaffold_0_29
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30861..31499)
DNA (639bp) protein (213aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Carbonic anhydrase bin=GWA2_Flavobacterium_35_26 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
carbonate dehydratase
PLM4_32_b1_sep16_scaffold_0_30
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31590..33245)
DNA (1656bp) protein (552aa)
Membrane protein {ECO:0000313|EMBL:KFC58073.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Probable sulfate permease bin=GWA2_Flavobacterium_35_26 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
sulfate transporter
Displaying items 1-30 of 101 in total

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