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PLM4_32_b1_sep16_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_6_1
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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274..819
DNA (546bp) protein (182aa)
Glutathione peroxidase Tax=Flavobacterium sp. CF136 RepID=J3C6I6_9FLAO
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
glutathione peroxidase
PLM4_32_b1_sep16_scaffold_6_2
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(923..1867)
DNA (945bp) protein (315aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
dihydrouridine synthase Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002F010FB
tRNA-u20a,u20b-dihydrouridine synthase
PLM4_32_b1_sep16_scaffold_6_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1950..2447)
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FG65_FLAJ1
Phosphinothricin acetyltransferase {ECO:0000313|EMBL:KIA86169.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
N-acetyltransferase GCN5
PLM4_32_b1_sep16_scaffold_6_4
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2594..4267
DNA (1674bp) protein (558aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
2-oxoglutarate decarboxylase (EC:4.1.1.71)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase Tax=Flavobacterium frigoris PS1 RepID=H7FWF4_9FLAO
PLM4_32_b1_sep16_scaffold_6_5
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4416..5270
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Flavobacterium sp. CF136 RepID=J2JW23_9FLAO
GntR family transcriptional regulator {ECO:0000313|EMBL:KIA86171.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_6_6
unknown

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comp(5764..5901)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_6_7
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6122..6979)
DNA (858bp) protein (286aa)
Uncharacterized protein Tax=Flavobacterium enshiense DK69 RepID=V6S8V0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC59791.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_6_8
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7492..7695)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Flavobacterium limnosediminis JC2902 RepID=V6SPP9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28648.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
PLM4_32_b1_sep16_scaffold_6_9
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8059..9393)
DNA (1335bp) protein (445aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Integral membrane sensor signal transduction histidine kinase Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMR7_FLAJ1
integral membrane sensor signal transduction histidine kinase
PLM4_32_b1_sep16_scaffold_6_10
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9395..10744)
DNA (1350bp) protein (450aa)
Two component sigma-54 specific Fis family transcriptional regulator Tax=Flavobacterium sp. F52 RepID=J0S344_9FLAO
ATPase AAA {ECO:0000313|EMBL:KIA86672.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
two component sigma-54 specific Fis family transcriptional regulator
PLM4_32_b1_sep16_scaffold_6_11
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10885..11916
DNA (1032bp) protein (344aa)
RND transporter Tax=Flavobacterium antarcticum RepID=UPI0003B39B0C
RND transporter {ECO:0000313|EMBL:KIA86673.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
RND family efflux transporter MFP subunit
PLM4_32_b1_sep16_scaffold_6_12
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12161..12865
DNA (705bp) protein (235aa)
phosphonate ABC transporter ATP-binding protein Tax=Flavobacterium antarcticum RepID=UPI0003B3FAFA
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIA86674.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
ABC transporter-like protein
PLM4_32_b1_sep16_scaffold_6_13
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12878..15319
DNA (2442bp) protein (814aa)
Uncharacterized protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMQ2_FLAJ1
Multidrug ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIX21022.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_6_14
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15367..17790
DNA (2424bp) protein (808aa)
Uncharacterized protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMQ2_FLAJ1
Multidrug ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIA86677.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_6_15
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17783..19087
DNA (1305bp) protein (435aa)
hypothetical protein Tax=Flavobacterium antarcticum RepID=UPI0003B63518
Uncharacterized protein {ECO:0000313|EMBL:KIA86678.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Outer membrane protein
PLM4_32_b1_sep16_scaffold_6_16
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19290..19664)
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FFS9_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KFC58678.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_6_17
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19701..20894)
DNA (1194bp) protein (398aa)
Alanine dehydrogenase Tax=Flavobacterium sp. CF136 RepID=J2IX75_9FLAO
Alanine dehydrogenase {ECO:0000313|EMBL:KFC58679.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
NAD(P) transhydrogenase subunit alpha
PLM4_32_b1_sep16_scaffold_6_18
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20985..21464)
DNA (480bp) protein (160aa)
Acetyltransferase, N-acetylglutamate synthase Tax=Flavobacterium sp. CF136 RepID=J3BY30_9FLAO
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:EJL60476.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
GCN5-like N-acetyltransferase
PLM4_32_b1_sep16_scaffold_6_19
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21473..21880)
DNA (408bp) protein (136aa)
ATPase, YjeE family Tax=Flavobacterium sp. CF136 RepID=J2S5F7_9FLAO
Hydrolase {ECO:0000313|EMBL:KIA99473.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_6_20
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22000..23553)
DNA (1554bp) protein (518aa)
Response regulator Tax=Flavobacterium frigoris PS1 RepID=H7FVC5_9FLAO
Chemotaxis protein CheY {ECO:0000313|EMBL:KIA86779.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
response regulator receiver protein
PLM4_32_b1_sep16_scaffold_6_21
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23955..25187
DNA (1233bp) protein (411aa)
Phosphohydrolase {ECO:0000313|EMBL:KIA86774.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
HD superfamily phosphohydrolase bin=GWA2_Flavobacterium_35_26 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
metal dependent phosphohydrolase
PLM4_32_b1_sep16_scaffold_6_22
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25317..26360
DNA (1044bp) protein (348aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
UDP-3-O-acylglucosamine N-acyltransferase Tax=Flavobacterium sp. CF136 RepID=J2JQS0_9FLAO
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
PLM4_32_b1_sep16_scaffold_6_23
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26344..27741
DNA (1398bp) protein (466aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
N-acetylglucosamine deacetylase / (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase Tax=Flavobacterium frigoris PS1 RepID=H7FVB3_9FLAO
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase
PLM4_32_b1_sep16_scaffold_6_24
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27812..28597
DNA (786bp) protein (262aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Tax=Flavobacterium frigoris PS1 RepID=H7FVB2_9FLAO
PLM4_32_b1_sep16_scaffold_6_25
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28658..29251
DNA (594bp) protein (198aa)
elongation factor P Tax=Flavobacterium sp. ACAM 123 RepID=UPI00031E901A
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
efp; elongation factor P (EF-P)
PLM4_32_b1_sep16_scaffold_6_26
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29320..30249
DNA (930bp) protein (310aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Tax=Flavobacterium sp. CF136 RepID=J3C3D1_9FLAO
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase {ECO:0000313|EMBL:KIA86770.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
PLM4_32_b1_sep16_scaffold_6_27
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30251..30613
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Flavobacterium sp. F52 RepID=J0S2Q9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC58632.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_6_28
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30698..31570
DNA (873bp) protein (291aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
succinyl-CoA synthetase subsunit alpha Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003092790
succinyl-CoA synthetase subunit alpha
PLM4_32_b1_sep16_scaffold_6_29
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31643..32071
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Flavobacterium sp. CF136 RepID=J3C358_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF15121.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_6_30
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32154..32546)
DNA (393bp) protein (131aa)
MrsB2 protein {ECO:0000313|EMBL:KFC58629.1}; EC=1.8.4.12 {ECO:0000313|EMBL:KFC58629.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
methionine sulfoxide reductase B Tax=Flavobacterium sp. ACAM 123 RepID=UPI00031C0AB4
methionine sulfoxide reductase B
Displaying items 1-30 of 84 in total

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