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PLM4_32_b1_sep16_scaffold_28

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Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_28_1
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(313..981)
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FGB5_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KFC57648.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_28_2
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1065..2153
DNA (1089bp) protein (363aa)
peptidase M42 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002DEA242
Peptidase M42 {ECO:0000313|EMBL:KFC57649.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
peptidase M42
PLM4_32_b1_sep16_scaffold_28_3
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2308..2514
DNA (207bp) protein (69aa)
Putative membrane protein Tax=Flavobacterium sp. CF136 RepID=J2JGV5_9FLAO
Membrane protein {ECO:0000313|EMBL:KFF02718.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_28_4
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2655..2930
DNA (276bp) protein (92aa)
Putative membrane protein Tax=Flavobacterium sp. CF136 RepID=J2JGV5_9FLAO
Membrane protein {ECO:0000313|EMBL:KFF02718.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_28_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3039..3581)
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Flavobacterium saliperosum S13 RepID=V6SMY0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC57650.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PLM4_32_b1_sep16_scaffold_28_6
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3663..4043)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Flavobacterium sp. CF136 RepID=J3C9T9_9FLAO
Ankyrin {ECO:0000313|EMBL:KIA95569.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
ankyrin
PLM4_32_b1_sep16_scaffold_28_7
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4378..5334)
DNA (957bp) protein (319aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Flavobacterium sp. WG21 RepID=UPI00034BF3F9
PLM4_32_b1_sep16_scaffold_28_8
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5492..5725)
DNA (234bp) protein (78aa)
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002EF45EF
Haloacid dehalogenase {ECO:0000313|EMBL:KFC58675.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
cof family hydrolase
PLM4_32_b1_sep16_scaffold_28_9
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5754..6290)
DNA (537bp) protein (179aa)
HAD-superfamily hydrolase, subfamily IIB Tax=Flavobacterium sp. CF136 RepID=J2SNU2_9FLAO
Haloacid dehalogenase {ECO:0000313|EMBL:KFC58675.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
cof family hydrolase
PLM4_32_b1_sep16_scaffold_28_10
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6566..7516)
DNA (951bp) protein (317aa)
phosphate starvation protein PhoH Tax=Flavobacterium sp. WG21 RepID=UPI00034C862F
Phosphate starvation protein PhoH {ECO:0000313|EMBL:KFC58674.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PhoH family protein
PLM4_32_b1_sep16_scaffold_28_11
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7754..8026)
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC58673.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PLM4_32_b1_sep16_scaffold_28_12
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8156..8986
DNA (831bp) protein (277aa)
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002F365C6
Uncharacterized protein {ECO:0000313|EMBL:KFC58671.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_28_13
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9213..9509
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GYK2_FLAPJ
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KFC58670.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
antibiotic biosynthesis monooxygenase
PLM4_32_b1_sep16_scaffold_28_14
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9572..10297
DNA (726bp) protein (242aa)
Uncharacterized protein Tax=Flavobacterium sp. F52 RepID=J1AAU8_9FLAO
ABC transporter permease {ECO:0000313|EMBL:KFC58669.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_28_15
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10297..11982
DNA (1686bp) protein (562aa)
Gliding-associated putative ABC transporter substrate-binding component GldG Tax=Flavobacterium sp. CF136 RepID=J2K1L3_9FLAO
Gliding motility protein GldG {ECO:0000313|EMBL:KFC58668.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
gliding motility ABC transporter auxiliary component-like protein
PLM4_32_b1_sep16_scaffold_28_16
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12119..13291
DNA (1173bp) protein (391aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
PLM4_32_b1_sep16_scaffold_28_17
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13672..15444)
DNA (1773bp) protein (591aa)
DNA mismatch repair protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002D49483
DNA mismatch repair protein {ECO:0000313|EMBL:KFC58899.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
DNA mismatch repair protein MutS domain-containing protein
PLM4_32_b1_sep16_scaffold_28_18
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15581..16414)
DNA (834bp) protein (278aa)
universal stress protein UspA Tax=Flavobacterium sp. ACAM 123 RepID=UPI000312A584
Universal stress protein UspA {ECO:0000313|EMBL:KFC58898.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
UspA domain-containing protein
PLM4_32_b1_sep16_scaffold_28_19
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16633..17466)
DNA (834bp) protein (278aa)
universal stress protein UspA Tax=Flavobacterium antarcticum RepID=UPI0003B59B58
Uncharacterized protein {ECO:0000313|EMBL:KFC58897.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
UspA domain-containing protein
PLM4_32_b1_sep16_scaffold_28_20
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17637..19025
DNA (1389bp) protein (463aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
tRNA modification GTPase MnmE Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=MNME_FLAPJ
tRNA modification GTPase MnmE
PLM4_32_b1_sep16_scaffold_28_21
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19473..20039
DNA (567bp) protein (189aa)
Excisionase-like protein Tax=Flavobacterium frigoris PS1 RepID=H7FW03_9FLAO
Excisionase-like protein {ECO:0000313|EMBL:EIA07324.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
DNA binding domain-containing protein
PLM4_32_b1_sep16_scaffold_28_22
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20486..21859
DNA (1374bp) protein (458aa)
hypothetical protein Tax=Aquimarina agarilytica RepID=UPI000288DA1E
Uncharacterized protein {ECO:0000313|EMBL:KGE13708.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
PLM4_32_b1_sep16_scaffold_28_23
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21832..22497
DNA (666bp) protein (222aa)
hypothetical protein Tax=Aquimarina agarilytica RepID=UPI00028A3467
Uncharacterized protein {ECO:0000313|EMBL:KGE13709.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
PLM4_32_b1_sep16_scaffold_28_24
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22500..25652
DNA (3153bp) protein (1051aa)
hypothetical protein Tax=Aquimarina agarilytica RepID=UPI0002896999
Uncharacterized protein {ECO:0000313|EMBL:KGE13710.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
Hypothetical protein
PLM4_32_b1_sep16_scaffold_28_25
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25649..26566
DNA (918bp) protein (306aa)
hypothetical protein Tax=Aquimarina agarilytica RepID=UPI000287E3F6
Uncharacterized protein {ECO:0000313|EMBL:KGE13711.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_28_26
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26961..27344)
DNA (384bp) protein (128aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D39AB
Contig_75, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ14517.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
tnp_2; transposase for insertion sequence-like element IS431mec
PLM4_32_b1_sep16_scaffold_28_27
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27428..29911)
DNA (2484bp) protein (828aa)
Type VII secretion-associated serine protease mycosin {ECO:0000313|EMBL:GAF05326.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
Subtilisin-like serine protease bin=GWF2_Bacteroidetes_42_66 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
subtilisin-like serine protease
PLM4_32_b1_sep16_scaffold_28_28
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29918..30871)
DNA (954bp) protein (318aa)
AAA+ family ATPase Tax=Desulfovibrio sp. U5L RepID=I2PX31_9DELT
AAA+ family ATPase {ECO:0000313|EMBL:EIG52087.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
AAA ATPase
PLM4_32_b1_sep16_scaffold_28_29
Nonlabens ulvanivorans, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31010..31963
DNA (954bp) protein (318aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK75627.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens ulvanivorans.;"
PLM4_32_b1_sep16_scaffold_28_30
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32349..32915
DNA (567bp) protein (189aa)
Excisionase-like protein Tax=Flavobacterium frigoris PS1 RepID=H7FW03_9FLAO
Excisionase-like protein {ECO:0000313|EMBL:EIA07324.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
DNA binding domain-containing protein
Displaying items 1-30 of 82 in total

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