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PLM4_32_b1_sep16_scaffold_51

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_51_1
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..858)
DNA (858bp) protein (286aa)
non-specific serine/threonine protein kinase (EC:2.7.11.1)
Non-specific serine/threonine protein kinase Tax=Flavobacterium sp. F52 RepID=J0RXG5_9FLAO
Serine/threonine protein kinase {ECO:0000313|EMBL:KFC60113.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PLM4_32_b1_sep16_scaffold_51_2
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(865..1629)
DNA (765bp) protein (255aa)
SAM-dependent methyltransferase Tax=Flavobacterium frigoris PS1 RepID=H7FQI5_9FLAO
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIA92890.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
type 11 methyltransferase
PLM4_32_b1_sep16_scaffold_51_3
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1709..2083)
DNA (375bp) protein (125aa)
NADH:ubiquinone oxidoreductase subunit 5 Tax=Flavobacterium antarcticum RepID=UPI0003B65030
Uncharacterized protein {ECO:0000313|EMBL:ESU29440.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
GTP-binding signal recognition particle
PLM4_32_b1_sep16_scaffold_51_4
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2252..3070)
DNA (819bp) protein (273aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Methionine aminopeptidase Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GWQ7_FLAPJ
methionine aminopeptidase
PLM4_32_b1_sep16_scaffold_51_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3280..4536
DNA (1257bp) protein (419aa)
membrane protein Tax=Flavobacterium sp. WG21 RepID=UPI00034B7444
Membrane protein {ECO:0000313|EMBL:KFC60116.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_51_6
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4667..5941
DNA (1275bp) protein (425aa)
4-hydroxybutyrate CoA-transferase {ECO:0000313|EMBL:KGD69267.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
4-hydroxybutyrate coenzyme A transferase bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
4-hydroxybutyrate CoA-transferase
PLM4_32_b1_sep16_scaffold_51_7
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6024..7541)
DNA (1518bp) protein (506aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
phosphoglyceromutase (EC:5.4.2.1)
phosphoglyceromutase Tax=Flavobacterium sp. WG21 RepID=UPI00034BEAC4
PLM4_32_b1_sep16_scaffold_51_8
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7668..10085)
DNA (2418bp) protein (806aa)
Putative uncharacterized protein Tax=Flavobacterium frigoris PS1 RepID=H7FQJ3_9FLAO
Hydrolase {ECO:0000313|EMBL:KIA87410.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_51_9
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10211..12052)
DNA (1842bp) protein (614aa)
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002E0724C
Hydrolase {ECO:0000313|EMBL:KFC60120.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_51_10
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12130..12564)
DNA (435bp) protein (145aa)
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002E0724C
Hydrolase {ECO:0000313|EMBL:KIA87411.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_51_11
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12753..13475
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Flavobacterium sp. CF136 RepID=J3C9L3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA92881.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_51_12
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(13697..14143)
DNA (447bp) protein (149aa)
Acetyltransferase Tax=Flavobacterium sp. CF136 RepID=J2SNM2_9FLAO
Acetyltransferase {ECO:0000313|EMBL:KFF19932.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
acetyltransferase
PLM4_32_b1_sep16_scaffold_51_trna_1
unknown

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14279..14351
DNA (73bp)
transferRNA Gly
PLM4_32_b1_sep16_scaffold_51_trna_2
unknown

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14403..14475
DNA (73bp)
transferRNA Gly
PLM4_32_b1_sep16_scaffold_51_13
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14620..15327)
DNA (708bp) protein (236aa)
(Alpha)-aspartyl dipeptidase {ECO:0000313|EMBL:KFC60122.1}; EC=3.4.13.21 {ECO:0000313|EMBL:KFC60122.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
peptidase E (EC:3.4.13.21)
Dipeptidase E Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FJ18_FLAJ1
PLM4_32_b1_sep16_scaffold_51_14
unknown

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15479..15676
DNA (198bp) protein (66aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_51_15
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15713..16435
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Flavobacterium sp. F52 RepID=J1AEA2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC60123.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_51_16
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16425..17186
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FJ21_FLAJ1
Strain DSM 12611 Contig08, whole genome shotgun sequence {ECO:0000313|EMBL:KIO52964.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_51_17
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17352..18107
DNA (756bp) protein (252aa)
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002D9FCC1
Uncharacterized protein {ECO:0000313|EMBL:KFC60126.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_51_18
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18186..18689
DNA (504bp) protein (168aa)
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003694C12
Uncharacterized protein {ECO:0000313|EMBL:KFC60127.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_51_19
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18756..20999
DNA (2244bp) protein (748aa)
Zn-dependent aminopeptidase Tax=Flavobacterium frigoris PS1 RepID=H7FQT8_9FLAO
Aminopeptidase {ECO:0000313|EMBL:KFC60128.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
aminopeptidase N-like protein
PLM4_32_b1_sep16_scaffold_51_20
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21170..21568
DNA (399bp) protein (133aa)
Sec-independent translocation protein {ECO:0000313|EMBL:KFC60129.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Sec-independent protein translocase protein TatA bin=GWA2_Flavobacterium_35_26 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
sec-independent translocation protein mttA/Hcf106
PLM4_32_b1_sep16_scaffold_51_21
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21568..22164
DNA (597bp) protein (199aa)
PA-phosphatase-like phosphoesterase Tax=Flavobacterium sp. F52 RepID=J1AE98_9FLAO
Phosphoesterase {ECO:0000313|EMBL:KFC60130.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PA-phosphatase-like phosphoesterase
PLM4_32_b1_sep16_scaffold_51_22
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22645..23286)
DNA (642bp) protein (214aa)
O-methyltransferase {ECO:0000313|EMBL:KDN54482.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
O-methyltransferase bin=GWA2_Flavobacterium_35_26 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
O-methyltransferase
PLM4_32_b1_sep16_scaffold_51_23
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23586..24974
DNA (1389bp) protein (463aa)
Uncharacterized protein Tax=Flavobacterium sp. F52 RepID=J1ALS7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJG03324.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
PLM4_32_b1_sep16_scaffold_51_24
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24987..25580
DNA (594bp) protein (198aa)
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003697272
Uncharacterized protein {ECO:0000313|EMBL:EJG03323.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
PLM4_32_b1_sep16_scaffold_51_25
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26477..27520
DNA (1044bp) protein (348aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849, ECO:0000256|SAAS:SAAS00181427};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Probable dual-specificity RNA methyltransferase RlmN bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
radical SAM protein
PLM4_32_b1_sep16_scaffold_51_26
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27597..28451)
DNA (855bp) protein (285aa)
Hypothetical lipoprotein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FJ07_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KFC59506.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_51_27
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28766..29743
DNA (978bp) protein (326aa)
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:EIA09086.1}; EC=2.5.1.- {ECO:0000313|EMBL:EIA09086.1};; EC=2.5.1.1 {ECO:0000313|EMBL:EIA09086.1};; EC=2.5.1.10 {ECO:0000313|EMBL:EIA09086.1};; EC=2.5.1.29 {ECO:0000313|EMBL:EIA09086.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
Octaprenyl-diphosphate synthase Tax=Flavobacterium frigoris PS1 RepID=H7FQU9_9FLAO
polyprenyl synthetase
PLM4_32_b1_sep16_scaffold_51_28
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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29924..30481
DNA (558bp) protein (186aa)
RNA polymerase sigma-70 factor Tax=Flavobacterium sp. WG21 RepID=UPI000349104B
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KFF06704.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
ECF subfamily RNA polymerase sigma-24 factor
Displaying items 1-30 of 93 in total

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