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PLM4_32_b1_sep16_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_55_1
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..129
DNA (129bp) protein (43aa)
Uncharacterized protein Tax=Flavobacterium sp. F52 RepID=J1KPQ3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJF99785.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
PLM4_32_b1_sep16_scaffold_55_2
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(581..1825)
DNA (1245bp) protein (415aa)
Penicillin-binding protein, beta-lactamase class C Tax=Flavobacterium sp. CF136 RepID=J3BXZ0_9FLAO
Penicillin-binding protein {ECO:0000313|EMBL:KFC58454.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
beta-lactamase
PLM4_32_b1_sep16_scaffold_55_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2485..6915
DNA (4431bp) protein (1477aa)
Uncharacterized protein Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VM29_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK58034.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
putative cell wall surface anchor family protein
PLM4_32_b1_sep16_scaffold_55_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7023..8261
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQE1_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51421.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
PLM4_32_b1_sep16_scaffold_55_5
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8538..9740
DNA (1203bp) protein (401aa)
Alanine dehydrogenase Tax=Flavobacterium sp. CF136 RepID=J2IW18_9FLAO
Alanine dehydrogenase {ECO:0000313|EMBL:KIA85755.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
NAD(P) transhydrogenase subunit alpha
PLM4_32_b1_sep16_scaffold_55_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10088..11533)
DNA (1446bp) protein (482aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
fumC; fumarate hydratase (EC:4.2.1.2)
fumarate hydratase Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002EC48D3
PLM4_32_b1_sep16_scaffold_55_7
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11732..12142)
DNA (411bp) protein (137aa)
Putative uncharacterized protein Tax=Flavobacterium frigoris PS1 RepID=H7FN49_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA09841.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_55_8
unknown

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12241..12423
DNA (183bp) protein (61aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_55_9
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12503..15193)
DNA (2691bp) protein (897aa)
Zinc protease Tax=Flavobacterium frigoris PS1 RepID=H7FPC5_9FLAO
Peptidase M16 {ECO:0000313|EMBL:KFC58460.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
peptidase M16
PLM4_32_b1_sep16_scaffold_55_10
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15523..16215
DNA (693bp) protein (231aa)
Aspartate racemase Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FH02_FLAJ1
Aspartate racemase {ECO:0000313|EMBL:KIA83989.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
aspartate racemase
PLM4_32_b1_sep16_scaffold_55_11
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16799..19246
DNA (2448bp) protein (816aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase Tax=Flavobacterium frigoris PS1 RepID=H7FUD6_9FLAO
PLM4_32_b1_sep16_scaffold_55_12
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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19233..20129
DNA (897bp) protein (299aa)
Probable formate transporter 1 Tax=uncultured Desulfobacterium sp. RepID=E1YAH5_9DELT
formate/nitrite transporter
Tax=RBG_13_Chloroflexi_68_17_curated
PLM4_32_b1_sep16_scaffold_55_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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20136..22826
DNA (2691bp) protein (897aa)
Formate dehydrogenase, alpha subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJB4_NIAKG
formate dehydrogenase subunit alpha
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:AEV98647.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM4_32_b1_sep16_scaffold_55_14
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22831..23289
DNA (459bp) protein (153aa)
OsmC family protein Tax=Gillisia limnaea DSM 15749 RepID=H2C093_9FLAO
OsmC family protein {ECO:0000313|EMBL:EHQ03509.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
osmc family protein
PLM4_32_b1_sep16_scaffold_55_15
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23379..25112
DNA (1734bp) protein (578aa)
Uncharacterized protein Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BL04_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM81155.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
Acetate--CoA ligase
PLM4_32_b1_sep16_scaffold_55_16
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25179..26690
DNA (1512bp) protein (504aa)
Uncharacterized protein Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BUE3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM81154.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
protease Do
PLM4_32_b1_sep16_scaffold_55_17
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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26703..27698
DNA (996bp) protein (332aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
Uncharacterized protein Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BTB5_9BACT
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
PLM4_32_b1_sep16_scaffold_55_18
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27908..28906
DNA (999bp) protein (333aa)
Pyruvate dehydrogenase subunit beta Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BX02_9BACT
Pyruvate dehydrogenase subunit beta {ECO:0000313|EMBL:ERM81151.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
pyruvate dehydrogenase
PLM4_32_b1_sep16_scaffold_55_19
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28899..30083
DNA (1185bp) protein (395aa)
Uncharacterized protein Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BKZ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM81150.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
branched-chain alpha-keto acid dehydrogenase subunit E2
PLM4_32_b1_sep16_scaffold_55_20
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30080..30325
DNA (246bp) protein (82aa)
Acyl carrier protein Tax=Cecembia lonarensis LW9 RepID=K1KW88_9BACT
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_55_21
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30322..31425
DNA (1104bp) protein (368aa)
SREBP protease/CBS domain protein Tax=Flavobacterium frigoris PS1 RepID=H7FUD1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA86387.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
peptidase M50
PLM4_32_b1_sep16_scaffold_55_22
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31418..32557
DNA (1140bp) protein (380aa)
Phospholipase D/Transphosphatidylase Tax=Flavobacterium frigoris PS1 RepID=H7FUD0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA86386.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
phospholipase D/Transphosphatidylase
PLM4_32_b1_sep16_scaffold_55_23
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33003..34064
DNA (1062bp) protein (354aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
Putative RNA-directed DNA polymerase, msDNA specific Tax=Flavobacterium frigoris PS1 RepID=H7FUC7_9FLAO
Putative RNA-directed DNA polymerase, msDNA specific {ECO:0000313|EMBL:EIA07804.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
PLM4_32_b1_sep16_scaffold_55_24
Leptospira wolbachii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

34077..34238
DNA (162bp) protein (54aa)
Uncharacterized protein Tax=Leptospira wolbachii serovar Codice str. CDC RepID=R8ZYS8_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EOQ95108.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolbachii serovar Codice str. CDC.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_55_25
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34672..35589
DNA (918bp) protein (306aa)
DnaJ-class molecular chaperone CbpA Tax=Flavobacterium frigoris PS1 RepID=H7FUC4_9FLAO
Molecular chaperone DnaJ {ECO:0000313|EMBL:KFC58716.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
chaperone DnaJ domain-containing protein
PLM4_32_b1_sep16_scaffold_55_26
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35763..36056
DNA (294bp) protein (98aa)
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI000375BD97
Uncharacterized protein {ECO:0000313|EMBL:KFC58717.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
transcriptional regulator, MerR family
PLM4_32_b1_sep16_scaffold_55_27
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36159..36941
DNA (783bp) protein (261aa)
ABC transporter permease protein Tax=Flavobacterium frigoris PS1 RepID=H7FUC0_9FLAO
ABC transporter permease {ECO:0000313|EMBL:KIA86380.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
ABC-type transport system, permease component
PLM4_32_b1_sep16_scaffold_55_28
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36948..37697
DNA (750bp) protein (250aa)
Methionine ABC transporter ATP-binding protein Tax=Flavobacterium enshiense DK69 RepID=V6S1K9_9FLAO
Organic solvent ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGO95913.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
ABC-type transport system, ATPase component
PLM4_32_b1_sep16_scaffold_55_29
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37706..38692
DNA (987bp) protein (329aa)
ABC transporter permease Tax=Flavobacterium saliperosum S13 RepID=V6SMS0_9FLAO
ABC transporter permease {ECO:0000313|EMBL:KFC58721.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
ABC transporter permease
PLM4_32_b1_sep16_scaffold_55_30
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38734..39771
DNA (1038bp) protein (346aa)
hypothetical protein Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003104DD0
Pesticidal protein Cry7Aa {ECO:0000313|EMBL:KIA86377.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
glycosidase-like protein
Displaying items 1-30 of 65 in total

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