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PLM4_32_b1_sep16_scaffold_128

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_128_1
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3..173
DNA (171bp) protein (57aa)
Putative uncharacterized protein Tax=Flavobacterium frigoris PS1 RepID=H7FLL6_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA10558.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_128_2
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(235..897)
DNA (663bp) protein (221aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFF01484.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
Putative iron transport related ATP-binding protein bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
ABC transporter-like protein
PLM4_32_b1_sep16_scaffold_128_3
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1271..1531)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FNV1_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03119.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
PLM4_32_b1_sep16_scaffold_128_4
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1691..2719)
DNA (1029bp) protein (343aa)
ABC-type Fe3+-siderophore transport system, permease component Tax=Flavobacterium sp. CF136 RepID=J3C8F7_9FLAO
Iron ABC transporter {ECO:0000313|EMBL:KFC61043.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
iron ABC transporter
PLM4_32_b1_sep16_scaffold_128_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2727..3869)
DNA (1143bp) protein (381aa)
Iron ABC transporter Tax=Flavobacterium enshiense DK69 RepID=V6S854_9FLAO
Iron ABC transporter {ECO:0000313|EMBL:KFC61042.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Fe3+-siderophore binding protein
PLM4_32_b1_sep16_scaffold_128_6
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3959..4216)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC61041.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PLM4_32_b1_sep16_scaffold_128_7
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4364..5080
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Flavobacterium limnosediminis JC2902 RepID=V6SKP6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27024.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_128_8
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5125..5634
DNA (510bp) protein (170aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Tax=Flavobacterium limnosediminis JC2902 RepID=V6SRH2_9FLAO
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase {ECO:0000313|EMBL:KFC61038.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
cobinamide kinase
PLM4_32_b1_sep16_scaffold_128_9
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5725..7440
DNA (1716bp) protein (572aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZL0_FLAPJ
PLM4_32_b1_sep16_scaffold_128_10
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7531..8328
DNA (798bp) protein (266aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Cobalamin synthase Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZK9_FLAPJ
cobalamin biosynthesis protein CobS
PLM4_32_b1_sep16_scaffold_128_11
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8313..8933
DNA (621bp) protein (207aa)
Alpha-ribazole phosphatase Tax=Flavobacterium sp. CF136 RepID=J2JEF8_9FLAO
Phosphoglycerate mutase {ECO:0000313|EMBL:KFC61033.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
phosphoglycerate mutase
PLM4_32_b1_sep16_scaffold_128_12
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9394..11241
DNA (1848bp) protein (616aa)
TonB-dependent outer membrane receptorprecursor Tax=Flavobacterium limnosediminis JC2902 RepID=V6SKA2_9FLAO
TonB-dependent outer membrane receptorprecursor {ECO:0000313|EMBL:KFC61032.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
TonB-dependent receptor
PLM4_32_b1_sep16_scaffold_128_13
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11246..12343
DNA (1098bp) protein (366aa)
Hypothetical lipoprotein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FNU6_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KFC61031.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_128_14
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12523..13977)
DNA (1455bp) protein (485aa)
Carboxyl-terminal protease Tax=Flavobacterium frigoris PS1 RepID=H7FLK9_9FLAO
Peptidase S41 {ECO:0000313|EMBL:KFC61027.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
peptidase S41
PLM4_32_b1_sep16_scaffold_128_15
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14099..14608
DNA (510bp) protein (170aa)
RNA polymerase sigma-70 factor Tax=Flavobacterium sp. WG21 RepID=UPI0003494453
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KFC61026.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
ECF subfamily RNA polymerase sigma-24 factor
PLM4_32_b1_sep16_scaffold_128_16
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14595..15044
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Flavobacterium sp. F52 RepID=J0RRL7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC61025.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_128_17
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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15127..15654
DNA (528bp) protein (176aa)
Putative uncharacterized protein Tax=Flavobacterium frigoris PS1 RepID=H7FLK6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA87677.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_128_18
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15656..16195
DNA (540bp) protein (180aa)
Putative uncharacterized protein Tax=Flavobacterium frigoris PS1 RepID=H7FLK5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC61022.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_128_19
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16254..16889)
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC61021.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
id=3192856 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
PLM4_32_b1_sep16_scaffold_128_20
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16879..17640)
DNA (762bp) protein (254aa)
Putative xanthine dehydrogenase accessory factor Tax=Flavobacteriales bacterium ALC-1 RepID=A8UJL5_9FLAO
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:KFC61020.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
XdhC protein
PLM4_32_b1_sep16_scaffold_128_21
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17827..20010)
DNA (2184bp) protein (728aa)
Aldehyde dehydrogenase (Pyrroloquinoline-quinone) Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RBY7_CELLC
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:KFC61019.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
twin-arginine translocation pathway signal protein
PLM4_32_b1_sep16_scaffold_128_22
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20013..20471)
DNA (459bp) protein (153aa)
Isoquinoline 1-oxidoreductase (EC:1.3.99.16)
Isoquinoline 1-oxidoreductase Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RBY6_CELLC
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KFC61018.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PLM4_32_b1_sep16_scaffold_128_23
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21342..24662
DNA (3321bp) protein (1107aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
GGDEF domain protein Tax=Mariniradius saccharolyticus AK6 RepID=M7XLC6_9BACT
hypothetical protein
PLM4_32_b1_sep16_scaffold_128_24
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24689..26038
DNA (1350bp) protein (450aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Uncharacterized protein Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BIS2_9BACT
integral membrane sensor signal transduction histidine kinase
PLM4_32_b1_sep16_scaffold_128_25
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26052..29615
DNA (3564bp) protein (1188aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Sensor protein zraS Tax=Fibrisoma limi BUZ 3 RepID=I2GK44_9BACT
histidine kinase
PLM4_32_b1_sep16_scaffold_128_26
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29629..33153
DNA (3525bp) protein (1175aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Sensor protein zraS Tax=Fibrisoma limi BUZ 3 RepID=I2GK44_9BACT
hypothetical protein
PLM4_32_b1_sep16_scaffold_128_27
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33262..33645
DNA (384bp) protein (128aa)
hypothetical protein Tax=Flavobacterium rivuli RepID=UPI0003717B12
Uncharacterized protein {ECO:0000313|EMBL:KFC60686.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
response regulator receiver protein
PLM4_32_b1_sep16_scaffold_128_28
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33638..34681
DNA (1044bp) protein (348aa)
hypothetical protein Tax=Flavobacterium rivuli RepID=UPI00037FF9C4
Uncharacterized protein {ECO:0000313|EMBL:KFC60687.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
guanylate cyclase
PLM4_32_b1_sep16_scaffold_128_29
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35025..35387)
DNA (363bp) protein (121aa)
Outer membrane lipoprotein omp16 Tax=Flavobacterium frigoris PS1 RepID=H7FWG7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC61017.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PLM4_32_b1_sep16_scaffold_128_trna_3
unknown

Not on your lists

comp(35908..35980)
DNA (73bp)
transferRNA Lys
Displaying items 1-30 of 66 in total

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