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PLM4_32_b1_sep16_scaffold_270

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_270_1
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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261..1616
DNA (1356bp) protein (452aa)
Amino acid permease Tax=Flavobacterium sp. F52 RepID=J1KZF4_9FLAO
Amino acid permease {ECO:0000313|EMBL:KFF19108.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
amino acid permease
PLM4_32_b1_sep16_scaffold_270_2
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1728..3638
DNA (1911bp) protein (637aa)
Secreted prolyl oligopeptidase family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCC1_NIAKG
Peptidase S9 {ECO:0000313|EMBL:KGO92473.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
secreted prolyl oligopeptidase family protein
PLM4_32_b1_sep16_scaffold_270_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3810..6443)
DNA (2634bp) protein (878aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase Tax=Flavobacterium frigoris PS1 RepID=H7FRM0_9FLAO
PLM4_32_b1_sep16_scaffold_270_4
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6598..6993
DNA (396bp) protein (132aa)
Putative uncharacterized protein Tax=Flavobacterium frigoris PS1 RepID=H7FRL9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC58472.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_270_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7047..8378)
DNA (1332bp) protein (444aa)
Periplasmic protease Tax=Flavobacterium sp. CF136 RepID=J3BWU6_9FLAO
Signal protein PDZ {ECO:0000313|EMBL:KFC58471.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
PDZ/DHR/GLGF domain-containing protein
PLM4_32_b1_sep16_scaffold_270_6
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8503..9696
DNA (1194bp) protein (398aa)
Aspartate aminotransferase {ECO:0000313|EMBL:EIA09000.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EIA09000.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
aspC2; aspartate transaminase AspC2 (EC:2.6.1.1)
Aspartate aminotransferase Tax=Flavobacterium frigoris PS1 RepID=H7FRL7_9FLAO
PLM4_32_b1_sep16_scaffold_270_7
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9927..10598
DNA (672bp) protein (224aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 Tax=Flavobacterium sp. CF136 RepID=J3BW52_9FLAO
PLM4_32_b1_sep16_scaffold_270_8
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10745..12223
DNA (1479bp) protein (493aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
PLM4_32_b1_sep16_scaffold_270_9
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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12287..12535
DNA (249bp) protein (83aa)
Putative membrane protein insertion efficiency factor Tax=Flavobacterium sp. F52 RepID=J0RW13_9FLAO
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_270_10
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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12615..13544
DNA (930bp) protein (310aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
diacylglyceryl transferase Tax=Flavobacterium sp. ACAM 123 RepID=UPI00030B6F2C
prolipoprotein diacylglyceryl transferase
PLM4_32_b1_sep16_scaffold_270_11
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13679..13900)
DNA (222bp) protein (74aa)
Antibiotic biosynthesis monooxygenase Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FW26_9SPHI
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EEI92806.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
uncharacterized protein
PLM4_32_b1_sep16_scaffold_270_12
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(13903..14496)
DNA (594bp) protein (198aa)
NAD(P)H dehydrogenase (Quinone) Tax=Flavobacterium frigoris PS1 RepID=H7FV39_9FLAO
NADPH quinone reductase MdaB {ECO:0000313|EMBL:KGD67832.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
NAD(P)H dehydrogenase (quinone)
PLM4_32_b1_sep16_scaffold_270_13
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14602..15495
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family Tax=Flavobacterium frigoris PS1 RepID=H7FV40_9FLAO
LysR family transcriptional regulator {ECO:0000313|EMBL:KFC58464.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
LysR family transcriptional regulator
PLM4_32_b1_sep16_scaffold_270_14
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15603..18572)
DNA (2970bp) protein (990aa)
Protein-export membrane protein SecD / Protein-export membrane protein SecF Tax=Flavobacterium frigoris PS1 RepID=H7FRL1_9FLAO
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KFC58463.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
bifunctional preprotein translocase subunit SecD/SecF
PLM4_32_b1_sep16_scaffold_270_15
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18793..19728)
DNA (936bp) protein (312aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Malate dehydrogenase bin=GWA2_Flavobacterium_35_26 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
malate dehydrogenase
PLM4_32_b1_sep16_scaffold_270_16
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(19779..21722)
DNA (1944bp) protein (648aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
DNA gyrase subunit B Tax=Flavobacterium RepID=H7FRK9_9FLAO
gyrB; DNA gyrase subunit B
PLM4_32_b1_sep16_scaffold_270_17
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(21903..23579)
DNA (1677bp) protein (559aa)
Asparagine synthetase Tax=Flavobacterium sp. CF136 RepID=J2ITY2_9FLAO
AsnB protein {ECO:0000313|EMBL:KIQ17272.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
asnB; asparagine synthetase B
PLM4_32_b1_sep16_scaffold_270_18
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23772..24416)
DNA (645bp) protein (215aa)
Putative uncharacterized protein Tax=Flavobacterium frigoris PS1 RepID=H7FRK7_9FLAO
Amidohydrolase {ECO:0000313|EMBL:KIA85084.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Amidohydrolase 3
Displaying 18 items

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