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PLM4_32_b1_sep16_scaffold_1029

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1029_1
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..575)
DNA (573bp) protein (191aa)
Flp pilus assembly protein bin=GWA2_Elusimicrobia_66_18 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
type II secretion system protein
Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
PLM4_32_b1_sep16_scaffold_1029_2
unknown

Not on your lists

comp(545..784)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1029_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(797..1789)
DNA (993bp) protein (331aa)
Type II secretion system F domain protein bin=GWA2_Deltaproteo_65_63 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
type II secretion system protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM4_32_b1_sep16_scaffold_1029_4
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1792..3117)
DNA (1326bp) protein (442aa)
Flp pilus assembly ATPase TadA Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A3R2_PELCD
Flp pilus assembly ATPase TadA
Flp pilus assembly ATPase TadA {ECO:0000313|EMBL:ABA88995.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
PLM4_32_b1_sep16_scaffold_1029_5

Not on your lists

comp(3133..4302)
DNA (1170bp) protein (390aa)
Response regulator receiver protein Tax=Geobacter sp. M18 RepID=C6MUN1_9DELT bin=ACD20 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Response regulator receiver protein {ECO:0000313|EMBL:EKE02829.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
response regulator receiver domain-containing protein
PLM4_32_b1_sep16_scaffold_1029_6
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4330..5454)
DNA (1125bp) protein (375aa)
Uncharacterized protein Tax=Desulfovibrio fructosivorans JJ RepID=E1JTP3_DESFR
Uncharacterized protein {ECO:0000313|EMBL:EFL52172.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_1029_7
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5451..6557)
DNA (1107bp) protein (369aa)
Type II and III secretion system protein Tax=Pseudomonas fluorescens group RepID=Q4KIU4_PSEF5
type II and III secretion system protein
Putative type II secretion system protein {ECO:0000313|EMBL:ETK24191.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;"
PLM4_32_b1_sep16_scaffold_1029_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6608..7474)
DNA (867bp) protein (289aa)
SAF domain Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028Y9_SOLUE
SAF domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_1029_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7500..7910)
DNA (411bp) protein (137aa)
TadE family protein bin=GWC2_Deltaproteobacteria_66_88 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
TadE family protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM4_32_b1_sep16_scaffold_1029_10
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7859..8428)
DNA (570bp) protein (190aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036920B8
type IV leader peptidase family protein
Type IV prepilin peptidase TadV/CpaA {ECO:0000313|EMBL:GAM15627.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus selenatarsenatis SF-1.;"
PLM4_32_b1_sep16_scaffold_1029_11
unknown

Not on your lists

comp(8474..8635)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1029_12
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9139..9504
DNA (366bp) protein (122aa)
id=14624314 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=CSP1_8_Deltaproteobacteria
PLM4_32_b1_sep16_scaffold_1029_13
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

9515..10408
DNA (894bp) protein (298aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_b1_sep16_scaffold_1029_14
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10788..11234
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO01426.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_1029_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

11234..13186
DNA (1953bp) protein (651aa)
Protease-like protein Tax=Janthinobacterium sp. HH01 RepID=L9PBV0_9BURK bin=16ft_combo_ws3_JS1 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
protease-associated PA
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_1029_16
unknown

Not on your lists

13392..13724
DNA (333bp) protein (111aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1029_17
unknown

Not on your lists

13709..13972
DNA (264bp) protein (88aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1029_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

14087..14989
DNA (903bp) protein (301aa)
Putative uncharacterized protein Tax=Streptomyces sp. e14 RepID=D6KGP5_9ACTO bin=16ft_combo_ws3_JS1 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_1029_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15050..15325
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z192_METPS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_1029_20
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15485..17437
DNA (1953bp) protein (651aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4YCD5_SORCE
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_32_b1_sep16_scaffold_1029_21
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

17531..19189
DNA (1659bp) protein (553aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI00035FDAC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY48189.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM4_32_b1_sep16_scaffold_1029_22
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19186..19905
DNA (720bp) protein (240aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00036CE6C7
virulence factor family protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_32_b1_sep16_scaffold_1029_23
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20076..20408
DNA (333bp) protein (111aa)
hypothetical protein Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483EBA
Uncharacterized protein {ECO:0000313|EMBL:KIA97520.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_1029_24
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

20518..20721
DNA (204bp) protein (68aa)
UPI0003CE3B46 related cluster Tax=unknown RepID=UPI0003CE3B46
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
PLM4_32_b1_sep16_scaffold_1029_25
unknown

Not on your lists

21106..22743
DNA (1638bp) protein (546aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1029_26
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22843..23454)
DNA (612bp) protein (204aa)
Uncharacterized protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VA8_RHOFD
Uncharacterized protein {ECO:0000313|EMBL:GAO36992.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_1029_27
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(23574..23918)
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS73255.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
Displaying 27 items

View Taxonomy